Kryptolebias marmoratus (mangrove rivulus): 108243017
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Entry
108243017 CDS
T05608
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108243017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108243017
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108243017
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
108243017
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
108243017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
108243017
NCBI-ProteinID:
XP_024864355
UniProt:
A0A3Q3AUK1
LinkDB
All DBs
Position
LG9:18377214..18381772
Genome browser
AA seq
442 aa
AA seq
DB search
MNCTKKSEVGDKAGIKDDLYFIEDFGGSDEEEEFNYGHRSSIKQTAQLGEGSPPLLLSFP
ITSGRTQQNTSSVSSQEEEGGSNLPVEEWMILGGEEQEEDSNILLNLSSWSSSEDVFGDK
DEPEEKPVPDIWAVSEKDRYGSAQSLALRYFIPGRSSICYVCNKAGHFAKHCTSEKKSPT
CVLCGIQGHIQRDCPGRPCPHCGLPSHSLDPCRVPPVWKQHCQRCGATGHLTDACPDTWR
QYHLTVKLEVPFKPRTACSLKQKSHRAHCYNCSKRGHHGFECTRRRMISGTFPSLPYVCH
YDTVEDILQRGSRMHTLTKKLVSAGSLPSSERTEDCGEMKGRSRKKQEAAGRRKTWPERR
RERREVKRLRREARVRREGGGLPRRSRCGLDGEVCPADPFGHEQLVPPPKKKRKAEKDGQ
KSRRSREAERWRKRGGLKRGGL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcacgaagaaaagcgaagttggtgacaaagcaggaatcaaagacgatctttac
ttcattgaggactttgggggttcagacgaggaggaagagtttaattatggacacagaagc
agcattaaacaaactgcgcagctcggggagggctcacctccgctcctcctcagcttcccc
atcacttcaggaaggactcagcagaacaccagcagtgtctccagtcaggaggaggagggg
ggcagtaacctgcccgtagaggagtggatgatcctgggaggagaggagcaggaggaggac
tccaacatcctcctcaatctgagttcctggagcagctctgaagacgtgtttggagataaa
gatgaaccagaggagaaaccagtaccagacatctgggccgtgtcagagaaggacaggtac
ggttctgctcagtctttggcccttcgctacttcatccccggccgctcttcaatctgttac
gtttgcaacaaggcgggacactttgctaaacattgcacctctgaaaagaagagtcctact
tgtgtcctttgcggcatccagggacacatccagagggactgtccaggccgtccctgtcct
cactgtggactgccttcgcacagcctggacccctgcagggtgcctccggtgtggaagcaa
cactgccaacgctgcggggcgactggccacctgacagacgcctgtccagatacatggaga
cagtatcacctgacagtgaagttggaggttcctttcaagccaagaacggcctgcagcctc
aaacagaagagtcatcgtgctcattgttacaactgctccaaaaggggacatcatggcttt
gagtgcacgaggaggaggatgatcagtggcacctttccttcgctgccgtacgtttgccac
tatgacaccgtggaggacatcctgcagcgaggctcccggatgcacacgttaaccaaaaag
ctcgtgagcgctggatcccttccgtcttcggaaagaacagaggactgcggcgagatgaaa
gggaggagcaggaaaaagcaggaggcggcaggaaggaggaaaacgtggcccgaaaggcgc
agagagaggcgggaggtgaagcggctgagaagggaggcccgggtcaggcgggagggcggc
gggcttccgaggaggtctcgctgcggcctcgatggcgaggtttgccccgccgaccccttc
ggacacgaacagctcgtcccgcctccgaagaaaaaaaggaaggcggagaaagacgggcaa
aagagcaggaggagcagagaagcggagaggtggaggaaaagaggcgggcttaaacgtgga
ggtttgtag
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