Kryptolebias marmoratus (mangrove rivulus): 108243258
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Entry
108243258 CDS
T05608
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108243258 (col28a1b)
Peptidases and inhibitors [BR:
kmr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
108243258 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
108243258
NCBI-ProteinID:
XP_017284059
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Position
LG16:complement(2796758..2818087)
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AA seq
1204 aa
AA seq
DB search
MLLQRSLSRGPGLCLLLFALLHDATGQRRKTARRKNYKQLDDGGNDYNKKSPQAAGPACS
LEVAFILDSSESAKLLLFEQQKAFVLRFSTRLSALQVAGWALEVRMAALQFSSSVSVEHR
FTDWNDLDSFHGRVNTMSYIGQGTYTTFAITNASLLLMQETPKDSVRVAVLMTDGVDHPR
NPNVLVAAAEAKGRGIRFFTIGLSDVAQQSENNDKLRAIASSPAQQFVQSLQDPQLDEKL
LREMRAVALEGCSQNQVCLCEKGDRGPPGNPGRKGDPGDRGLLGLKGARGEPGFNGQPGS
DGRQGRPGYKGNKGERGECGAPGEKGDAGAEGPAGPPGPQGEQGPTGPVGDMGPEGPAGS
KGDRGPIGAPGPAGDFRIGFPGTKGEKGLQGRPGAAGPVGIGGPGLPGPPGPHGLQGNPG
PPGEGFPGPKGDRGFDGPRGNRGLPGVGVKGDKGNLGPPGVQGPVGDPGFGLQGEKGDQG
PVGPPGPRGAPGVGIPGPKGNQGPPGEPGQPGERGVGAPGPKGDPGAPGSAGLPGLQGED
GSPGQKGDTGLPGLRGPDGAPGKGAAGEKGDKGDRGSRGEPGRLGPEGPSGPKGEPGKLG
LPGLSGPPGRGIPGAKGEPGPQGPAGAVGESGVGLPGPKGDRGPPGPLGLPGLKGDGYSG
PPGLPGLPGLPGEIGPDGVGLPGPKGDRGLPGPPGPAGPPGIGLIGPMGPVGVMGPRGPP
GLPGEGIQGQKGEPGFQGLPGPRGPPGQGLQGDKGDRGLRGEKGKKGDRGPAGAPGDGGP
AGRVGQKGEPGLTRDEIIRIIRSICSCGVKCSQTPLELVFVIDSSESVGPENFNVIKDFV
NAAVDRASVSGDATRVAVVLYSHINAVVVSLEQEATQDEIRSAVRSMSYLGEGTYTGSAL
QQANRVFGAARAGVRKVAVVITDGQADRRDSVSLESAVTEAKENEIEMFVIGVVNESDPL
SEEFKKELSFMASDPDRDHMFLIADFQILQALEKRLLTCIFEDVEKNLFGPIPSSLLLPG
IPEVSGSVPNPPYETDSDSPTFPGDFEKVQMMPGSPASHPDRVPIPPESPDEDRTTSETQ
RFPFFDSEPFRPVTEFLPQFDVNKFHMTEAVGPDGSTLRAPTRKEMPAPSPPSSPSPPPL
PSDPHTSAEGCSQILDPGPCRDYVVKWYYDATSNACAQFWFGGCLGNKNQFESEEKCSQT
CVKF
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcagagaagcctgagcagaggtccggggctctgccttctgctgtttgctctt
cttcacgacgccactggccagaggagaaagacggcacgcaggaaaaactacaagcagctt
gatgacggaggaaacgactataataagaagtctccacaggctgcaggtccagcgtgctcc
ctggaggtggccttcatcctggacagctctgagagcgccaagctgctcctgtttgagcag
cagaaggccttcgtgctgagattcagcacccggctctccgcgctgcaggtggccggctgg
gccctcgaggtgcggatggcggcgcttcagttcagcagctccgtgtccgtcgagcacaga
ttcacagactggaatgacctggattcttttcacggtagagtcaacaccatgagctacatc
ggccaaggcacctacaccaccttcgccatcaccaacgcctccctgctactgatgcaggag
acgcccaaagacagcgtcagggtggcggtgctgatgaccgacggagtcgaccatccgcgc
aacccgaacgtgttagtggctgcggcagaggccaaaggtcgcggcatcaggttcttcacc
atcgggttgtcggacgtggcccagcagagcgagaacaacgacaagctccgcgccatcgcc
agctcccctgctcagcagttcgtccaaagtctgcaggaccctcagctggacgagaagctg
ctcagagagatgagagcagtcgctcttgaagggtgttcgcagaaccaggtgtgtttgtgt
gaaaaaggagacagaggccctcctggaaatcctggtagaaaaggagatccaggagacagg
gggctactcggtcttaaaggagcgaggggcgagcctggatttaatggtcagcctggaagt
gacggccgtcaggggcgtccgggttataaaggcaacaagggggagagaggagagtgcggc
gctcccggagaaaagggtgacgctggagcagaaggaccagcaggaccaccaggaccacaa
ggagaacagggtccaacaggaccagtcggagacatgggtcctgaggggccagcgggatcg
aaaggagaccgagggcccataggggcacctggacccgcaggagacttcaggatcggattc
ccaggaaccaaaggcgaaaagggccttcagggaagaccaggagctgcaggtcctgttggg
atcggagggccgggcctaccaggaccaccaggaccacatggactacaaggaaaccctggt
cctcctggagaagggtttccagggccaaaaggggatcgaggattcgatggtccacgagga
aaccgtggccttcccggggttggggtcaaaggtgacaagggtaatcttggacctccagga
gttcaaggtccagtcggtgatcctgggtttgggcttcaaggtgaaaagggagaccagggc
ccagttggacctccaggaccaagaggagctccaggcgttggaataccaggaccaaaaggg
aatcagggccccccaggtgagcctggacagccaggtgagagaggggtgggagcaccagga
cccaaaggagaccctggagctccggggtcagcaggattaccgggtcttcaaggggaagat
ggaagtccaggacaaaagggcgacaccggtttgccgggcctcaggggccctgacggggct
cctggtaaaggagctgctggtgagaagggagacaaaggggacagggggagccggggggag
ccaggccgcctcggtcctgaggggccatcggggccaaagggggaaccaggaaaactcgga
ctgccggggctgagcggaccgccgggcagggggattcctggtgccaagggagaaccgggt
ccacagggtcctgccggagccgtgggggagtcgggggtcggtttacccggacccaagggc
gacagaggaccaccaggacctcttgggctacctggactgaaaggtgacgggtactccgga
cccccggggcttccaggccttcctggcctgccgggagagatcggacccgatggcgtcggt
ttacctggaccaaagggagacaggggcttacctggaccacctggacctgctgggcctcca
ggaatcggtctaattggtccgatgggtccagttggtgtgatgggcccacgtggtcctcct
gggttacctggagaaggtatacaaggacagaagggggagcctggatttcaaggacttcct
ggacccagaggtcctccaggacaaggtctgcagggagacaagggagaccgaggactgaga
ggtgagaaaggcaagaagggagacagaggaccagctggagcgccaggagacggtggacct
gcgggcagagtcggacagaagggagaacctggactcactagggatgagatcatcagaata
atcagatccatatgcagctgtggggtgaagtgcagccaaacgcccttagagctggtgttc
gtgatcgacagctccgagagcgtgggcccggaaaacttcaacgtcatcaaagactttgtg
aacgccgcggtggaccgggcctcggtcagcggggatgccacgcgtgtcgccgtggtgctc
tacagccacatcaacgccgtggtggtgagcctggagcaggaagccacccaggacgagatc
aggtccgcggtgcgctccatgagctacctgggcgaggggacctacaccggcagcgccctc
cagcaggccaaccgggtgttcggggcggcccgggcgggcgtcaggaaggtggccgtcgtc
atcacggacgggcaggccgaccggagggactcggtcagcctggagagcgccgtgaccgaa
gctaaggagaacgaaatcgagatgtttgtgatcggcgtggtgaacgagagcgacccgctg
tccgaggagttcaagaaggagctgagcttcatggcgtccgaccccgacagagaccacatg
ttcctgatcgcagacttccagatcctgcaagctctggagaaaagactgctgacctgcatc
tttgaagacgttgagaagaatttgtttggtcccatcccgagctccctgctccttcctggg
atcccggaggtctccggcagcgttcccaatccgccgtacgagacggactcagactccccc
accttcccaggagacttcgagaaggttcagatgatgcccggctctccggcgtcccacccc
gacagggtgccgatccctcctgagagcccggacgaagacagaaccacctcggagactcag
aggttcccgttcttcgacagtgaacccttcaggcccgtaaccgagttcctcccgcagttc
gacgtgaacaaattccacatgactgaagccgtcgggccagatggttccaccctgagggcc
ccgactcggaaagagatgccagcaccgtcgccgccatcgtccccgtcacccccgccgctg
ccctcagacccccacacgtcagcagagggctgcagccagatcctggacccgggcccctgc
cgggactacgtggtgaagtggtactacgacgcgacgtctaacgcctgcgctcagttctgg
ttcggaggctgtctgggaaacaagaaccagtttgagagcgaggagaagtgtagccaaacc
tgcgtcaagttctaa
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integrated database retrieval system
