Kryptolebias marmoratus (mangrove rivulus): 108243287
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Entry
108243287 CDS
T05608
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
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GFIT
Motif
Pfam:
Sema
PSI
Herpes_US9
Motif
Other DBs
NCBI-GeneID:
108243287
NCBI-ProteinID:
XP_017284105
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Position
LG16:complement(3801285..3948619)
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AA seq
1086 aa
AA seq
DB search
MRLMPEPPRLILPAFLALTLVAFLPQLSSGAVPFPQDLEPISIVGRESSYLYHSFQGLMS
DNDTLRLGLDFQRMLRINRMLYVAARDHVFAINLASSSDQIIPQQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQRNS
ETAWTPVPDEQVPKPRPGSCAGEGSAAAYKTSTTFPDETLTFIKSYPLMDESVPSVNDRP
FFTRTTSRFKLTQIAVDTSAGPYKNYTVVFLGSDNGHVLKILASTEGANASFNTQLLEDI
DIYNPNKCNVRGEDRRVLGLELDRDHHALFVAFSSCVIRVPLSRCSEYTNCKKSCLSSRD
PYCIWLKSGSCVTISPGFKGGFEQDVENGYHQHPDNCHDVLATTRKQNTALDSVYGKTTP
TSASTTRHGAAFPKEAGDSERGTGPDRLPPVGEKGSPDSEPISVEMEGVRRPPELERTNH
SVHYTLLIACVLVAFVLGAFVSGFLVSCYCNHTGHKTKKLSKDPEAPIPHALSLRSLAKL
NGLLDSQSKEDKLEVSSPKIYNSFFTNSKEHHPPRRNIHHGMTMGDLVHPHHHHLHTSSE
LSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNVGSRPSSAMLHQQVFPYAH
GLSNGQPVVGHLHPEERKIHNVERVLSQPYHSYSQKVMEVTSLDELLKHIHDANSSKNPQ
LMSPSGLMASGGGGQIAFSNRIQPHIPETESAPYYSSSTLPRDSLTRRMDVPPDIPSHHQ
STLERRHSSQRHSLIAAATKMPSAGAVGGGGMIPRQHSFSQRNGGPHQPPPLLARMNSTG
SACEVHYPLIPNGYLTRQHSYNGEQQEVQHRGAIVRRASSLKPDIPPKPLFIPATSPVNE
QGKFNY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgatgcccgaaccgcctcgactcatcctgccagccttcctggcgctcacctta
gtcgcctttttacctcagctgtcctcaggagctgtgccatttccccaagacctggaacca
atcagcattgtgggaagagaatcttcgtacctgtaccacagcttccaggggctcatgtca
gacaatgacacactccgcctgggcctggacttccaaaggatgctgaggatcaaccgcatg
ctttacgtcgctgcccgggaccacgtgtttgcaatcaatctggcctcatcgtctgatcag
atcatcccacagcagaagctgacgtggaaaacgaaggatgtggagaagtgcactgtgaga
gggaagaacagcgatgaatgttacaactacattaaagtgctggtgccacgcaacgacgag
acgctgttcgcctgcggcaccaatgccttcaatcccacctgccgtaactataagatgtca
acactggagcaggaaggagaggaggtggtgggacaggctcgatgtccctttgagtcccgc
cagtccaacgttggtcttttcgcaggtggtgatttctactctgcgaccatgactgacttc
ttggcgagtgatgcagtcatttacaggagtctgggtgaaagtagtcccgttctacgtacg
gtcaaatatgactccaaatggctacgagaacctcatttccttcacgctatcgagtatggg
aactacgtgtactttttcttcagcgagattgccgtggagtacaccactctaggaaaggtt
gttttctccagagttgcgcgtgtttgtaagaacgacaacgggggttccccgagggttctg
gaacgatactggacatctttcctgaaagcccgtctgaactgctccgtgcctggagattct
ttcttttactttgatgtcctgcagtcgctgaccaacgtcctgcagataaaccaccggccg
gccgtccttggagtttttaccacacaggcgaacagcatcactggctcagcagtctgtgct
ttctacatggacgacatagagaaggcctttaacggtaaattcaaggagcagaggaacagt
gagactgcttggacacctgttccagacgaacaagtcccaaagccaagaccaggcagctgc
gccggcgagggctctgcggcggcctacaagacatccaccaccttccctgatgagaccctg
actttcatcaagtcctatccactcatggacgagtccgttccttcagtcaacgacagaccc
ttcttcacccgcaccaccagcaggttcaagttgacccagattgcagtggatacctcagca
gggccgtataagaactacactgtggtgttcctgggttcagataacggtcatgttcttaag
atcttggccagcacagagggagccaatgcgtctttcaacacccagctcctggaggatatt
gatatctacaacccaaacaagtgcaacgtgcggggagaggacaggagggttctgggtctg
gagttggaccgggatcatcacgcactgtttgtggcgttctccagctgtgtaatccgtgtc
ccactcagccgctgctccgagtacaccaactgcaaaaagagctgtttgtcttcacgggac
ccttactgcatttggctcaagtcaggcagctgtgtgacaatctcacctggattcaaaggc
gggtttgaacaggatgtggagaatggctaccatcagcatcctgataactgtcacgacgtg
ttggcgaccactcgcaagcagaacacggcgctagattccgtgtatgggaagaccaccccc
acaagcgccagcactacccgtcatggggcggcattcccaaaggaggcaggtgactctgaa
agaggtacaggtcctgatcgccttccccctgtgggggaaaaagggtcacctgactcagag
ccaatcagtgtggagatggagggtgtgagacgacctccagagctggagaggactaatcac
agtgtccattacacccttctgatagcttgtgttttggtggcctttgtccttggagccttc
gtctctgggtttctggtctcatgctactgcaaccacacaggtcacaagacaaagaaattg
tcaaaggatcctgaagccccgatcccacatgctctgtcactccgtagtctggcaaagcta
aatggtctcctggacagccagagtaaagaggacaagctcgaggtgtcttctccaaaaatc
tacaattccttcttcactaacagcaaggagcatcacccaccaaggagaaatatccaccat
ggaatgacaatgggagacctggttcaccctcaccatcatcacctccacacctcctcagag
ctgtctggtctgcccacaccagactcaactcctgaactgcctatcaagagcatgaaagcc
ttcaagaaccaatgggagaagaaccagaactgcaacaatgccaaagaaccaaagtctcat
aacgttggttccaggcccagttcagctatgcttcaccagcaggtcttcccctacgcccat
ggcttgtccaatgggcagccagtagttggtcacctgcatccagaggaacgtaaaattcac
aatgttgagcgtgtgttatcgcagccttaccatagttactctcagaaggtgatggaggta
acatcgctggatgagcttctgaagcatatccatgatgcaaacagcagcaagaacccccag
ttaatgagcccatcaggcctgatggccagcggaggtggaggacagattgccttttccaac
agaattcaacctcatattcctgagacggaatcagccccctactacagctcctccacttta
cctcgggacagtcttacccgtcgcatggatgttccccctgacatcccctcacaccaccag
tccaccctagaaaggaggcactcctcccagcggcactcactgattgctgcagccaccaaa
atgcccagtgcgggagcagtcggaggaggaggaatgatcccccgccagcacagcttcagc
caacggaatggtgggcctcaccagccacctccacttttggcacggatgaactcaacaggc
agcgcttgcgaagttcactatcctctcatcccaaatgggtacctgacacgccaacatagc
tataatggagaacagcaggaggtccaacacagaggtgctattgtacgcagagcgtcctct
ctcaaacctgacatccctcctaagcccctgttcatacctgctacatctccagtcaatgaa
caagggaaatttaactactga
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