Kryptolebias marmoratus (mangrove rivulus): 108243298
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Entry
108243298 CDS
T05608
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108243298 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
kmr03310
]
108243298 (nr1d2a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108243298 (nr1d2a)
Nuclear receptors [BR:
kmr03310
]
1. Thyroid hormone like
1D. Rev-Erb
108243298 (nr1d2a)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
108243298
NCBI-ProteinID:
XP_017284128
UniProt:
A0A3Q3BAS4
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Position
LG16:2662810..2667682
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AA seq
553 aa
AA seq
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MPEDVGTAKAGGVIAYISSNSVSDSSGGYTSPAVPRPSLPSRAVGMVVDIAPPAKRGGAE
KAGRSAVSTKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKC
LKMENCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKREKQRMLLEMQNAMNNMMS
KNSELHNMLHGDQGPSLPMEAMSSDASSSSTSSFSTSDSPSCSSPSSPQCPQDSESVVSM
DTNSSSASSCASDSSEDEGAATVSRQHQGDFTFGQQRSPSAAPETGCGGGVEQRQESSNC
WNNNSPVVGYQRCPYSGAVTNSAFKEERGAGDFHTQSTFSRYNGPNSCVKSRAYLVCPMN
TSPYVDPNKPSQEIWEEFSMSFTPAVREVVEFAKRIPGFRDLSEHDQVSLLKAGTFEVLM
VRFASLFNLAERTVTFLSGKRYSLDTLRSLGAGELLSSMCEFSEKLAALRLNEDEMSLFT
AVVLVSADRSGIQDLDSLEALQDKLIWSLRNLVVQNHGDESATTFTKLLLKLPELRSLNN
MHSEELLSFKVHP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggacgtcgggacagccaaagccggaggagtcattgcctacatctcgtctaac
tccgtctcagactccagtggtggttacacgtcaccagctgtgcctcgaccctcgctgccc
agcagggccgtgggcatggtggtggacatcgcaccgccggcaaagcgaggcggcgccgag
aaggccggccgctctgccgtgtctaccaaaagcagcatcaccaaaatcaacgggatggtg
ctgctgtgcaaggtgtgtggagacgtggcctcgggtttccactacggcgtccacgcctgt
gaaggatgcaagggcttcttcaggcgaagcatccagcagaacatccagtacaagaagtgt
ctcaagatggagaactgcaccatcatgaggatcaacaggaaccgctgccagcagtgtcgc
ttcaagaagtgcctggctgtcggcatgtccagagacgctgtcaggtttggccgcatccca
aaaagagagaagcagaggatgctgctggagatgcagaacgccatgaacaacatgatgagc
aaaaacagcgagctgcacaacatgctgcacggcgaccagggcccctcgctgcccatggag
gcgatgagcagcgacgccagctcgtcgtccacttcctccttttctacctcggactctccg
tcgtgttccagcccgtcctcgcctcagtgcccccaggactcagagtctgtggtttccatg
gacaccaactccagctcggcctcgtcctgcgcgtcggacagcagcgaggacgagggcgcc
gccacggtgagcaggcagcaccaaggcgactttacgttcggccagcagaggtcaccatcg
gccgccccggagacgggctgcggcggtggcgtggagcagcggcaggagagctcgaactgc
tggaacaacaacagcccagtggtgggttaccagcgctgtccatacagcggcgccgtcact
aactccgccttcaaggaggagagaggagcgggagattttcacacacagagcaccttcagc
cgatacaacggaccaaacagctgcgtgaaaagcagagcgtacctggtctgcccgatgaac
acctcgccttacgtggacccgaacaagcccagtcaggagatctgggaggagttctccatg
agcttcacccccgccgtgcgggaggtcgtcgagttcgccaagaggatcccgggcttccgt
gacctctccgagcacgaccaagtgagcctgctgaaagccggaaccttcgaggtgctgatg
gtccggttcgcctccctgttcaacctggctgagcggacggtcaccttcctgagcggcaaa
aggtacagcctggacacgctgcggtcgctgggcgccggggagctgctctcttccatgtgc
gagttcagcgagaagctggcggccctgcggctcaacgaggacgaaatgagcctcttcact
gccgtggtgctcgtctcagccgaccgctcagggatccaggacctggactcgctggaggcc
ctgcaggacaagctgatctggtctctgcggaacctggtggtgcagaaccacggcgacgag
tcggccaccacgttcaccaagctgctgctgaagctccccgagctgcgttcgctcaacaac
atgcactcagaggagctgctctcgttcaaagttcacccctga
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