Kryptolebias marmoratus (mangrove rivulus): 108243310
Help
Entry
108243310 CDS
T05608
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108243310 (ddx10)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108243310 (ddx10)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
Helicases
108243310 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
108243310
NCBI-ProteinID:
XP_017284149
UniProt:
A0A3Q2ZEQ6
LinkDB
All DBs
Position
LG15:17167604..17171549
Genome browser
AA seq
824 aa
AA seq
DB search
MERKGGSKRKGAKTESPDPVRNFERWKKRYEKTKQRVKQKRLQNKKPAWRVEQEDINRLV
TKYEHINTKEVLKFSDFPISKKTLLGLQEAQYRQPTEIQRQTIGLALRGKDVLGAAKTGS
GKTLAFLIPVLECLYRHQWTSMDGLGALIISPTRELAYQTFEVLRKIGKNHEFSAGLVIG
GKDLQTESERISHTNIIICTPGRMLQHMDQTATFHASSLLMLVLDEADRILDLGFAETLN
AIVENLPKSRQTLLFSATQTKSVKDLARLSLKDPEYAWVHEQARFSTPASLEQNYVVCEL
HQKVNMLYSFIRTHLNKKVIVFFACCKEVQYLYRVFCRLRPGTPILALHGKQQQMKRVEV
YNMFLKKQSAVLFATDIAARGLDFPAVHWVLQVDCPEDADTYIHRVGRTARYKEGGEALL
LLLPSEEDGMVAQLQEKKVPINKIQVNPDKVQSVQLKLEAFLAQENEQKERAQRCFVSYL
RSVYLMKNKDVFDVFKLNIEDYALSLGLAVAPRVRFLHKAQAKRAEKEEEQSDEEEELRR
FKAQLRGGLPQEDSQSSDDDELDSDEDGDPSITAVLGADDRDEDDLRDLDFLTVKRKDVF
NLTQDQQSEEEADQVAKKKPEKETKYKEAKKLLKRNFQLNTKVTFNAEGQAVQLWPQVQR
AVTDKGDDEEDEVSGIDVEKAKERLRLEDQEFDKQEYSRKVKAKHREKRLKAKAARREAS
KRRRELNEEEEDEVTAYLANRSEDEFDPSTLPDPDQQHSSDQGEEEEEERESAKRQHSRD
EEEKLPLKKKKKTKQLEEEHASLDTGLSLAEDEELVLHLLGGRR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaaaggcggttcgaaacgtaaaggcgcaaagacagaaagcccagaccccgtg
agaaacttcgaaaggtggaagaagaggtacgagaagacgaagcaacgagtgaagcagaag
agactccagaataagaaacccgcatggcgcgtggagcaggaggacatcaacaggctcgtg
acaaagtacgaacacatcaacaccaaggaggtgctcaagttctcagacttccccatctcc
aagaaaaccctgctgggtctgcaggaggctcagtatcgacagcccaccgagatccagagg
cagaccatcggcctcgctctgcgggggaaagacgtcctcggtgcggccaagaccggctcc
gggaagacgctagccttcctcatcccagtgctggagtgtctgtaccgccaccagtggact
tccatggacggtctcggagccctcatcatatctcccacccgagaactggcctaccagacc
tttgaagtccttcgcaaaataggcaagaaccacgagttctccgcggggctcgtcatcggt
ggtaaggacctccagaccgagtcggagaggatctcccacaccaacattatcatctgcacc
ccgggccgcatgctccagcacatggaccagacggccaccttccacgctagcagcctgcta
atgctcgtcctggatgaggcggaccggatcctggacctgggctttgcagaaacacttaac
gccatcgtggagaacctccccaagtcacggcagacactgctgttctccgccacgcagacc
aagtccgtgaaagacctggcccggctcagcctgaaggatccggagtacgcctgggtccat
gaacaggctcggttcagcacaccggcctcgttagagcagaactacgtggtgtgtgagctc
caccagaaagttaacatgctctactctttcatcaggactcacctgaacaagaaggtcatt
gtctttttcgcctgctgtaaggaggtccagtacctgtaccgggtcttctgccgtctcagg
ccagggacccccatcctggccctgcacggcaaacagcagcagatgaagcgggtggaggtc
tacaacatgttcctcaagaagcagagtgctgtgctcttcgccaccgacatcgccgccaga
ggcctggactttcccgctgttcactgggtcctgcaggtggactgtccagaggacgcagac
acgtacatccacagagtaggtcggaccgcccgctacaaggagggaggagaggccctgctg
ctgctgctgccctctgaggaggacggcatggtggcccagctgcaggagaagaaggtcccc
atcaataagatccaggtgaacccagacaaagtgcagagtgtccagctgaagctggaggcc
ttcctggcccaagagaacgagcagaaagaaagagcccagaggtgctttgtctcctacctg
cgctcagtctatctaatgaagaacaaagatgtgtttgatgtctttaagctcaacatcgag
gactatgctctgtccctgggtctcgctgtggctcccagggtccgcttcctgcacaaagct
caggcgaaaagagctgagaaagaagaggagcagtcggacgaagaggaggagctcaggaga
tttaaagctcagctgagaggaggactgccccaggaggacagccagagcagcgacgatgat
gaacttgacagtgatgaagatggggatccgtccatcacagccgtgctcggtgcagacgac
agagatgaggacgatctccgagacttggactttctgacagtgaaaaggaaggatgtcttt
aatctgacccaggatcagcagagtgaagaagaagctgatcaggtcgccaagaaaaagcct
gaaaaagaaacaaaatataaagaggccaaaaagctcctcaagagaaactttcagctcaac
actaaagtgacgtttaatgctgaaggacaggctgtgcagctgtggccccaagtacagcga
gcagtcactgataaaggcgacgatgaagaggacgaggtttcagggatcgatgtggagaag
gccaaagagaggctgagactggaggatcaggagttcgacaagcaagaatacagccgcaag
gtgaaggccaaacaccgagagaagagactgaaggccaaggcagccaggagggaggcgagc
aaacggagacgggagctcaacgaggaggaggaggacgaagtcacggcctacctggccaat
cgcagcgaagacgagttcgaccccagcacgctgcccgatcctgaccaacagcactcctct
gaccagggcgaggaagaggaggaggagagggagtcagccaaacggcagcacagcagagat
gaagaggagaagctcccactgaagaaaaagaagaagacgaagcagctggaggaagagcac
gcatccctggatactggactgtctctggctgaagatgaggagttagttttacatctgctg
gggggacgaaggtag
DBGET
integrated database retrieval system
