Kryptolebias marmoratus (mangrove rivulus): 108243357
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Entry
108243357 CDS
T05608
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04371
Apelin signaling pathway
kmr04514
Cell adhesion molecules
kmr04520
Adherens junction
kmr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108243357
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108243357
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108243357
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108243357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108243357
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108243357
04090 CD molecules [BR:
kmr04090
]
108243357
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108243357
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Major cadherins
108243357
CD molecules [BR:
kmr04090
]
Proteins
108243357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
Big_9
Fimbrial
Motif
Other DBs
NCBI-GeneID:
108243357
NCBI-ProteinID:
XP_024864249
LinkDB
All DBs
Position
LG22:complement(11884097..11894986)
Genome browser
AA seq
675 aa
AA seq
DB search
MTVPVMVLHRGPHHNHHQNAEHQHGADKHHNLTTNTESAADPQVPILHFPKSSEGLKRRK
RDWVIPPLSVSENHRGPYPHKIAQIRSDKDKTTKIHYSITGPGADRDPVDLFTMDRTNGN
LFVTQELDREKQDKYPFQAHAVAEGGSEGSEQPMEIIVNVIDQNDNKPVFVEASYIAQVP
EASKKGFQVVQVVATDADEENTDNSEIRYSIESQTPEKPDKYMFSINPVTGAIKVNDERL
DRENYPQYELTVQVADNKGDGLTGSTKVTIKVTDSNDNAPVFTEATYKATVEENKVDAIV
VRMSVTDGDEPHTPAWNAKFKIIDGDPGNLFNVTTGVNKQEGILKTVKGLDFEKVSKHTL
LVAVENDVDFAVPLTTSTATVIVTVQDVNEAPIFDPKEKHVSKLENLAVGSEVVTYTAYD
PDTARKQKVMYKILADRGGWLEVNKDTGLITVKSPMDRESLFVTDNNYTALIGAYDNDEL
PATGTGTVFITLQDVNDNAPVIQEREFTMCNNDPQPQLLSVTDKDGPGFTYPYSVTLVKT
AETNWTAKMNGTKTGIILTLKTNLRSGVYHVGMSVSDNQGLSQVSTVTARVYYCTGGEGN
CQEERINHFTVNLIKLLVVLLLPITVLLVLFIKWRRQVKNLPPSKHDNTSHQEGGGEEDQ
NLELSALSRCPDNQP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcctgtcatggtgctgcatcgagggcctcatcataaccaccaccaaaatgct
gaacatcagcatggagcggacaaacaccacaatctgaccaccaacacagagagtgcagca
gatccacaggtgcccatcctgcattttcccaaatctagtgaaggactgaaaaggaggaag
agagactgggtcattcctcccctcagtgtttctgagaatcatagaggaccctacccccac
aaaatcgctcagatccgctctgataaggacaaaacaacaaaaatccattacagcatcact
ggtccaggagctgatcgggatcctgttgacctcttcaccatggacaggacgaatggtaac
ctgtttgtcacgcaagaacttgacagagaaaaacaagataagtacccatttcaagcacat
gctgtggcagaaggcggaagtgaaggttcagaacagcctatggagattatagtaaatgta
atcgaccaaaatgacaacaaacctgtttttgtggaggcctcctacatagcacaggttcct
gaggcctcaaagaaaggttttcaggtggttcaggttgtggcaactgatgctgatgaagaa
aacactgacaattctgaaatccgctacagtattgaaagccagacccctgagaagcctgac
aaatacatgttttccatcaacccagtcacaggagccatcaaagtcaatgatgaacgtctg
gaccgagagaattaccctcagtatgaactgactgttcaagtagcagacaataagggtgat
ggtttgactggatctacaaaagtaacaatcaaggtgacagacagcaacgacaacgctcca
gtctttacagaggcgacttacaaggcaacagttgaagaaaataaagtagacgctatagtt
gttcgaatgtcggtgacagacggtgatgaaccacatactccagcctggaacgccaagttc
aagattattgatggagatcctggaaaccttttcaatgtaacaacaggagttaacaaacaa
gaaggaatccttaaaactgtcaagggtcttgactttgagaaagtcagcaaacacactctg
ttggttgcagtggagaatgatgttgattttgcagttcctctgaccacttctacagctaca
gtaatagtaactgtgcaggacgtcaatgaagctccaatctttgatccaaaagaaaaacat
gtgtccaaacttgagaaccttgctgttggcagtgaggtggtgacgtacacggcttatgat
ccagacacggcacgcaaacagaaagtcatgtataaaatattagctgaccgaggaggctgg
ctggaggtaaataaggacacagggttgattacagtgaaaagtccaatggaccgggagtcc
ctttttgtaacggacaacaactacacagctcttattggtgcatatgataacgatgaactc
ccagccacaggaactggaactgtgttcattacgcttcaggatgtgaacgacaacgctcca
gtcatccaggaacgggaattcacgatgtgtaacaacgatccacaacctcagctgctgagt
gtaacagataaagatggaccgggcttcacctatccctacagcgtcactttagttaagact
gcagaaactaactggactgctaagatgaacggcaccaaaacaggcatcatcctgacttta
aaaaccaatcttaggagtggagtataccatgtgggcatgagtgtttcagacaaccagggt
ctgtctcaggtcagcacagtcacagccagagtttattactgcaccggaggagaaggaaac
tgccaagaagaacgtattaatcactttacagtcaacttgattaaacttttagttgtcctg
ctgctgcccataacagtgctgctggttctgttcataaagtggagaagacaagtgaaaaat
ctgcctccatctaaacatgacaatacctctcatcaagagggaggtggagaagaagatcag
aaccttgagctgagcgctctcagccgttgtcctgacaaccaaccatag
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