Kryptolebias marmoratus (mangrove rivulus): 108243392
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Entry
108243392 CDS
T05608
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
kmr04144
Endocytosis
kmr04510
Focal adhesion
kmr04540
Gap junction
kmr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108243392 (pdgfra)
04020 Calcium signaling pathway
108243392 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108243392 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108243392 (pdgfra)
04540 Gap junction
108243392 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108243392 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
kmr01001
]
108243392 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
kmr04090
]
108243392 (pdgfra)
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108243392 (pdgfra)
Protein kinases [BR:
kmr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
108243392 (pdgfra)
CD molecules [BR:
kmr04090
]
Proteins
108243392 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C2-set_2
Herpes_gE_N
Receptor_2B4
Kinase-like
Motif
Other DBs
NCBI-GeneID:
108243392
NCBI-ProteinID:
XP_017284260
UniProt:
A0A3Q3F2F7
LinkDB
All DBs
Position
LG24:complement(17603404..17620691)
Genome browser
AA seq
1375 aa
AA seq
DB search
MDGKKTFMVFGVILVLMVLVPPGLALPVISPDQHFLLVQANSLINISCSGEQDVVWIEPL
PKDAKVIPGVFSSTILIYNATKAHTGPYDCKYANPDIDKDRPMIFLFVQEPEIEVKFVVL
VKASEEKLRARQPLNISCITPLVPNLHQQWIHSTKQALNAIQTKETFHNRVEYTLSIPQA
TSQDSGVYECSVTHTVSGKTRASSVAVTVFEENSFLTLDHSGILTTEFVNILEATEYTIL
ISAYPVPKVSWLKDGKEMSENYYISTKTSHIEGNRYESILTFRHFLEKDNGNYTIRVQSG
SHTAQFSFVIKVRASAASVIPPSSAPVMLPDMDEMVVPLYTSFSLTCRGVAQLEWDMPFD
VPEQTQEDSSGLFVTTITVDSANVMNTGSYTCFYTTNSTDDTEESSIYVYVPDPDALFVP
SLGSFMNLVLPDHEEMVIPCRVSNPHAHVTLVNVDTQQPVPCVYDSKRGALGVFTAGTYV
CKATQKGKEYYSEEYIVHGVIGTLNVELWAKKTALLVGDTITVSCLARGPDILEDYWKYP
GKMASRGTKTVRENKRDQEVIYTLTIPQATTKDSGIYSCSITDIISNESQMKQLAIQVFA
SEFVSIKPEFRDYESAELDEVRDFRAKIDSFPDAHVTWFKDGIPLGEVTAEIATSLQQIS
EISYISVLILIRAKEEDSGNYTMHVQNGNQSHDVSFTLEVKVPAVIVDLMDLHHGSTTGQ
SVVCITRGQPTPVVEWFICKNIKHCANDSSSWLPLPTNSTEITTESHFNQASNLESQVMF
GHLESTLAVRCLARNEMATVSREVKLVSNGPHPELTVAAAVLVLLVIVIISLIVLVVIWK
QKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEG
TAYGLSHSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI
YIITEYCFYGDLVNYLHKNRENFHSMSPEKNKKELDIFGINPADESSRSYVILSFENKGD
YMDMKQVDNTQYVPMLEMSTSSKYSDIRRSNYDHPPSQKGLNESEMDTLLSDDSNEGLTT
ADLLSFTYQVARGMEFLASKNCVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSK
GSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSG
YRMSKPEHAPHDVYEMMMKCWNSEPEKRPSFMGLSDSVESLLPSSYKRHYERVNHDFLKS
DHPAVTRVCNETDADYIDIPYKNQGKLKDRESGFDEQRLSSDSGYIIPLPDLDPVSDEDY
GKRNRHSSQTSEESAIETGSSSSTYAKREGETLEDITLLDEMCLDCSDLVEDSFL
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaagaagactttcatggtctttggggttattcttgtgctgatggttttggtt
ccgcctggactggcgttaccagtcatcagtccggatcagcactttctgctcgtacaggcc
aactccctcattaacatcagctgctccggggaacaagacgtggtttggattgagcccctg
ccgaaagatgccaaagttattccaggagttttctcctcaactatattaatttacaacgca
actaaggcgcacactggtccttatgactgcaaatatgcaaacccggacattgacaaggat
cgtccaatgattttcctctttgtccaagaacctgagattgaggtgaaatttgtggtgctg
gttaaagcaagtgaagagaagttgagggcgaggcagcctctcaacatctcctgcatcacc
ccattagtgccaaacctccatcaacaatggatccattcaacaaaacaggctctgaatgca
attcagacaaaggagacttttcacaacagggtcgagtacaccctcagcatcccacaagcc
acctctcaggacagcggcgtttacgaatgctccgtcacgcacacagtcagcggaaaaacc
agagccagcagcgtggctgtgactgtttttgaggagaattcctttctgaccctggaccac
agtgggattctaacaacggagtttgtcaacattttagaggcgacagagtacactattctt
atcagcgcttaccctgtccccaaagtgtcatggctgaaagatggcaaagaaatgtctgaa
aactactacatctctactaaaacaagccacattgaagggaatcggtatgagagcattctg
acgttccggcattttctggagaaagacaatggaaattacaccatcagagtccagagtggc
tctcacacagctcagttctcttttgtcatcaaagtgagagcttcggccgcatcagtgatc
ccgccttcctcagcccctgtgatgctgccagatatggacgagatggtggtgcctctttac
acatctttcagcttgacgtgtcgcggagtggcacagctggagtgggatatgccttttgat
gtgccagaacaaacgcaggaggacagcagtggtctgtttgtcaccaccatcactgtggac
agtgcaaacgtaatgaacactggctcctatacatgcttctacaccacaaacagcacagat
gacacagaggaaagcagcatctacgtctacgtaccagatcctgatgctctgttcgtgccg
tcactggggtcttttatgaaccttgtcctgcccgaccacgaggagatggtgattccatgt
agggtgtctaacccacatgcccatgtcacactggtgaacgttgacacccagcagcctgta
ccttgtgtttatgacagtaaaaggggtgctttgggggtatttactgctggaacttatgtc
tgcaaggccacccaaaaaggaaaggagtactacagcgaggaatacatcgtacatggtgtg
ataggtacattgaatgttgagttgtgggccaaaaagactgctctgctggtgggggacaca
atcactgtcagctgtctggctcgaggacctgatatattggaagactactggaaataccct
ggcaaaatggccagtcgcggcaccaaaactgttcgtgaaaataaaagagaccaggaggtc
atttacaccctgacaattccacaagccacaaccaaagacagtggcatctactcctgttcc
atcactgacattatttctaatgaaagtcagatgaagcaacttgccatccaagtgtttgcc
agtgagtttgtatctatcaagccagagtttagggattatgaatctgctgagctggacgaa
gttcgggacttcagagcaaagatcgactcctttcccgatgctcatgtcacttggtttaaa
gatggcataccactcggtgaagtgacggctgagatcgccaccagcctgcagcagatcagt
gagatcagctacataagtgttctcatactgatccgtgccaaggaggaggacagtgggaac
tacactatgcacgtgcagaatggaaaccaaagtcatgatgtcagcttcaccctggaggtt
aaagtgcctgcagtcattgtggacctgatggacctccaccacggttcaaccacaggccag
tctgtggtgtgtatcaccagggggcagcccactcctgtggtggagtggttcatctgcaag
aacatcaaacattgtgccaatgattcgtcgtcttggctgcccctccccaccaactccaca
gagatcaccacggagtcgcacttcaatcaagcgagcaacctggagagccaggtcatgttc
ggccatcttgaaagcactctggcagtgcgttgccttgccaggaatgaaatggccaccgtc
agcagggaagtcaaactggtgtccaatggccctcatcctgagctgactgtagctgctgct
gtgctggtgctcctggtcatagtcatcatctcactcattgtcttggttgtcatctggaaa
cagaaaccaagatatgagatccgttggagggtcattgagtccgtgagcccagatggccat
gagtacatctatgtggatcccatgcagcttccctatgactccagatgggagtttccccgt
gacagacttgtcctcggtcgcatcctgggctctggggcttttgggaaggtggttgagggc
accgcctatggactcagccactctcagcctgttatgaaggtggcagtaaaaatgttgaaa
cccacggctcggtccagcgagaaacaggccctgatgtctgaactgaagatcatgactcat
ctcggaccccatctaaacattgttaacctcctgggagcatgcaccaagtcaggccctatc
tacattatcaccgagtactgcttctacggagacctggtcaactatctgcacaagaacagg
gagaacttccacagcatgagcccagagaaaaacaaaaaggagctggatatatttggtatc
aaccctgcagacgagagcagcagaagttacgtgatcctatcctttgagaataaaggagac
tacatggatatgaagcaggtggacaacactcagtatgtccccatgctggagatgagcacc
tcctccaagtactctgacatccggaggtctaactatgaccaccctccctcacagaaaggc
ttgaacgagtctgagatggacaccctgctgtcagatgactcgaacgaaggcctcacaacc
gctgacctgctgagctttacctaccaggtggccaggggaatggagtttctggcttccaaa
aactgcgtgcatcgggaccttgcagccaggaacgttctcctctcgcagggcaagattgtt
aagatctgtgactttggactggccagagacatcatgcatgacaacaactatgtctccaaa
ggaagcacatttttgccagtaaaatggatggcaccagaaagtatttttgacaacctctac
accactctcagtgatgtttggtcgtatggcatcctcctctgggaaatattctccttaggg
ggcacaccgtatccggggatggtggtggactccagcttctacaacaagatcaagagtgga
tacaggatgtcaaaaccagagcacgcaccacatgacgtgtatgagatgatgatgaaatgt
tggaacagtgagccggagaagaggccttccttcatgggtctgagtgactctgttgagtct
ttgctgccctccagctacaagaggcattacgagagagtgaaccatgactttctgaagagc
gaccatcctgctgtgactcgggtgtgcaacgaaactgacgcagattacatcgacatccca
tacaagaaccagggcaagctaaaagatcgggaaagcggctttgacgagcagcgcctgagc
tctgacagtggctacataatcccactcccggaccttgacccagtatctgatgaagactat
ggaaagaggaacagacacagctctcaaacatctgaggagagcgccattgagacagggtcg
agcagctccacctacgccaagcgtgagggcgagactctggaggacatcacgctgctggac
gagatgtgtctggactgtagtgacctggtggaggacagctttctgtga
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integrated database retrieval system
