Kryptolebias marmoratus (mangrove rivulus): 108243415
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Entry
108243415 CDS
T05608
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108243415 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108243415 (fip1l1a)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108243415 (fip1l1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
108243415
NCBI-ProteinID:
XP_037830126
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Position
LG24:complement(17749527..17770448)
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AA seq
387 aa
AA seq
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MSTPDSDFMEAAEDEDEDKLYQWIFELSRGEREEAGNEQSPCSSRDTRTPLEIIFEEKID
TAGSSQEVVKNIKKVKRPKQKEELFKEKPWTKPGAELSDYFNYGFDEESWRAYCKKQTEL
QAFQRSQGSKILAKKEHAQHREKVSRAFHSSGRRAIKACSRESEDDTDLKGGQAGRHNRN
KRRPSLSDAANNSQVLTEMPYKVDDISPCDSPPPASLKSLLDFVSPPSSLVRSGCSPSPT
ATQCSGLPEGFDGPSTSGYQSSSGSKAASPVMTDTTKAWECYIKQRKHGRDRVETRGYNH
HKRSRRSRYKGRQSSSSSHNSREEQRKNRVSTEHGCKCRSPERFCGQKRPRDKSEGWHQK
TQSSCNRKKDGSEDKHRRRKCDKKAKK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgccagactcagacttcatggaggccgccgaggacgaggacgaggacaaatta
tatcaatggatatttgaactcagcaggggtgagagggaggaggccggaaatgagcaaagc
ccttgcagctctcgggacacacgtactccacttgagattatttttgaagagaagatcgac
acagctggctcctcacaggaagtagttaagaatatcaaaaaagtcaaaaggccgaaacag
aaggaggagctttttaaggaaaaaccgtggacaaagcctggagctgagctttctgattac
ttcaactatgggtttgatgaagaaagctggagggcatattgtaagaaacagactgaactt
caagctttccaaagaagtcaaggctcaaaaatcctggccaaaaaggagcacgctcaacat
agagaaaaagtgtctcgtgcttttcactcctccggcagacgagctattaaagcctgcagc
agagagtcagaggatgacactgatttgaaaggaggacaagctggacgccacaacagaaac
aaaaggcgtccaagtctctctgatgcagccaacaattctcaggttcttactgagatgccc
tacaaggtggatgatatcagtccttgtgattcgcctcctccagccagcctcaagtctttg
ttagattttgtttctccaccatcttcccttgtccgatcaggatgctctccctcccccact
gccacccagtgcagtggactccccgaaggttttgatggcccctcaacttcaggataccaa
agttcttctgggagtaaggcagcaagtcctgtaatgactgatactaccaaggcttgggaa
tgctacataaaacagcgaaagcatggcagggacagagttgaaactagagggtacaaccac
cataagagaagcagaagatccagatacaaaggaagacaaagttcctcctcttcacacaac
agtagagaggagcaaaggaagaacagggtttccacagagcatgggtgcaaatgtcgcagc
ccggaaagattctgtggacaaaagaggccgagagacaaaagtgagggatggcaccaaaaa
acgcaaagcagctgtaacaggaaaaaggatggcagtgaggacaaacacaggagacgcaaa
tgtgacaaaaaggcaaagaagtag
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