| Entry |
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| Symbol |
npas1
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| Name |
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
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| KO |
| K09098 | neuronal PAS domain-containing protein 1/3 |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:kmr03000]
108243496 (npas1)
Transcription factors [BR:kmr03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108243496 (npas1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG2:12279022..12308437
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| AA seq |
806 aa
MASMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDSNCSKVRRSAHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCLTAPDSASSTASTSSLAGTPEPAPSSPHSQADDPPERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DLLQLPESIRAERLRVSSPPTDSSPQVRGQQSGKTSVGKSDPDTKGREKFTTPAIQSEDR
RKRVLRSDPEGAPPESRRRLEELRRTEEAVSASSDLASESEDEEEETEWDQGGDSDRLKQ
EDSGGGGKQSRGGETTPTRGERAGRVHNGRAVIQQLKSVVTPSSLPSSPSIKTEHEALTT
GGRWGSHTQTSTQHTHAPQPQPPSHAHTPSSSLNGDSPTTPIPDSSSSSDAPAKGLFTPP
SPALSPAMSVSSPQPREDRAVSRSGGGGNCPDFELLQRLAGGAAGRVLFHPLALGPQGPQ
SLYAPSTIRYAPPELPPSHHHGTGHGDGLQLRSDHHKGPPPTFFPHLQRLAGLPPFSGFS
PSDSPFSSGLPFCMNGLRGAAGSEED |
|---|
| NT seq |
2421 nt +upstreamnt +downstreamnt
atggcgagcatgccgttcgtcagcgaggggaagtgtgtgagcgtggagtgggatttccta
caaggacttcttgccaagcctcccaccctaccctgtctccagaacctgcgcaaagagaaa
tctcgcaatgcggctcgttctcggcgcgggaaggagaacttcgagttcttcgagctggcc
aagatgctgcctctgccgggggccatcaccagtcagctagacaaggcctccgtcatccgg
ctgaccatcagctacctgcacatgcgcacctttgccagccagggggacccgccgtggagc
cctctgctggagggggacagcaactgcagcaaagttcgacggtcagcccattctctggcc
actgacatgtttgagcagcacttaggagcacacctcctgcagtctctagatggctttgtg
tttgtggtcagccaggagggacgcttcctctacatctcagagacggtttctatctacctg
gggctctcacaggtggagctgaccggcagcagcgtgtttgactacatccaccctgcggac
cacgtggagatggccgagcggctgggcatcaggcctcatctccgggcggaggccggctgc
ctcacggcccccgacagcgcttccagcaccgcatccacctcctcgcttgccggtacccct
gaacctgctccctccagtccccactctcaggccgacgaccctccagaacgcggtttcttc
atccgcatgaagtccacgctcactaaaagaggcctgcatgtcaagtcctctggatataag
gtgatccacgtgaccggacgaatccgttgccgccccgcgctcgtcccgggctccacgcgc
tcggtccgtcgcccgatgggcttggttgccctggcgcacacgctcccgccctccacgctt
aatgaagtccgcatggagagccacatgtttgtcttccgagtcaacatggacctgcaggtc
acatattgcgagaacagaatctcagagtatatggatctgaccccggcggaggttgtggga
cacacctgttaccatttcatccatgtagaagacctggagaatatccgacagagccatgaa
gacttgctgaggaaaggtcaggtggtgacgggttactatcgctggcttcagaggagagga
ggatacctgtggatccagtccactgccaccgtctccatcaaccacaaagccccccacgaa
cgaaacgtcatctgggtcaactatgtcctgagtcggaccgagctgcccgacacccctctg
gatctgctgcagctcccggaaagcatacgagcggagcgacttcgagttagctcgcccccc
acggactcctccccccaagttcgaggccaacagtcggggaagacctcggtcgggaagagt
gaccccgacacgaaaggacgggagaagttcaccacccccgccatccagtcagaggacagg
aggaagcgcgtgctgaggtccgaccccgagggcgcgcctcccgaaagccgacgccgactg
gaggagctccggcgcacagaggaggccgtctcagcctcctcggatctggcgagcgaaagt
gaggacgaggaggaagagacagagtgggaccaggggggagacagcgacagactgaagcag
gaggacagcgggggaggagggaaacagagcagaggaggagagacgaccccgactagagga
gaaagagcagggagggtgcacaacggccgggcggtgatccagcagctgaagagtgtggtg
accccgtcttcgttgcccagcagtccgagcatcaagactgaacacgaagccctgaccact
ggagggcgctgggggtcgcacacgcagacctccacccagcacacacacgcccctcagccc
cagcctccgtcccacgcgcacacgccttccagcagcctgaacggcgacagccccaccacc
ccgatcccggactcgtcgtccagcagcgacgccccggctaaaggcttgttcacccctccc
tcccctgctctgtccccggccatgtcagtgtcctccccgcagccccgcgaggaccgggcg
gtgagtcgcagcggtggcggcggcaactgccccgacttcgagctgcttcagagactggca
ggcggcgcggcggggcgggtcctcttccacccgctcgctctcggcccgcagggccctcag
agcctgtacgccccgagcacgatccgatacgctccgccggagctgcccccctcccaccac
cacggcacgggccacggcgatggcctgcagctacgctcggaccaccacaagggacccccg
ccgaccttcttcccccacctgcagcggctggccggcctgccacccttcagtggtttctcc
ccgtctgacagccctttctcctccggcctgcccttctgtatgaacggactgaggggggcc
gcaggctcggaggaggactga |
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