| Entry |
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| Symbol |
ddx3xa
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| Name |
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
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| KO |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Pathway |
| kmr04622 | RIG-I-like receptor signaling pathway |
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108243552 (ddx3xa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:kmr03019]
108243552 (ddx3xa)
03041 Spliceosome [BR:kmr03041]
108243552 (ddx3xa)
03036 Chromosome and associated proteins [BR:kmr03036]
108243552 (ddx3xa)
Enzymes [BR:kmr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108243552 (ddx3xa)
Messenger RNA biogenesis [BR:kmr03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108243552 (ddx3xa)
mRNA cycle factors
Common to processing body (P body) and stress granule
108243552 (ddx3xa)
Spliceosome [BR:kmr03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108243552 (ddx3xa)
Chromosome and associated proteins [BR:kmr03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108243552 (ddx3xa)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG6:complement(26410096..26426442)
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| AA seq |
751 aa
MSHVVVDNPHGLDQQLAALDLNSADGQGGGSGRRYIPPHLRNKDASKNAGNAYSAGRQCG
YSVAPVNFFSSKQCPQPWQAECQQTQRNNCTSGWDDCHIGYPRLASQELAFYHAYTGGWR
NRCDSPGWDGGRTNGYVNGFHDNRTNGGFGGRGPPRNDRGFGGYENKDGGWGGPPRDAAY
NSFGGRNDRSKSTYFNDRGAGSRGRYERGGFAGGGNSRWAEDSREDDWSKPTAPNERLEN
ELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVDMGEIIMGNITLSRYTRPTPVQK
HAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGDALQTSKNSGQDNGRYGRRK
QYPLSLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATP
GRLVDMMERGKIGLDHCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGIRQTMMFSAT
FPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEETDKRSFLLDLLNATGKDSLT
LVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARG
LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILVEAK
QEVPSWLESLAYEHQHKSSSRGRSKRFSGGFGARDYRQTPGGSGGFNSNRAGRSAGGNRG
FGGGGFGGNFYNSDGYGGNYNHSGSVDWWGN |
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| NT seq |
2256 nt +upstreamnt +downstreamnt
atgagtcatgttgtcgttgataatccacacggtctagatcagcagcttgctgccctagac
ttaaactctgctgacggacaaggcggaggaagtggtaggcgttacattccacctcactta
aggaacaaagatgcttccaaaaacgcaggaaatgcttattccgctggtagacagtgcggt
tattcagtggcacccgtaaatttcttttcatctaagcagtgcccacaaccatggcaggct
gagtgccagcaaacacagagaaataactgtacttcaggatgggatgactgtcacattggt
tacccaagactggcctctcaagagcttgccttttaccatgcctacactggtggttggcga
aacagatgtgattcacctggatgggatggcggacgcaccaatggatatgtgaatggtttc
catgacaaccgcacaaacggtggttttggagggcgtggacctcctcgcaatgatagaggg
tttggaggttatgaaaacaaagatggtggctggggcggacctcctagggatgctgcctac
aacagctttggagggcgaaatgatcggtccaagtctacatactttaatgaccgtggagct
ggctcaagaggaaggtatgagcgtgggggctttgctggtggaggaaatagccgctgggcg
gaggactccagagaggatgactggtccaagcccactgcccccaatgaacgtctggaaaat
gagcttttctctggaagcaacactgggataaactttgagaaatatgatgatattcctgtg
gaggctactggatccaactgccctccccacattgagagtttccacgatgtggacatgggg
gagattatcatggggaacatcaccctgagtcgttacactcgtcccacccctgtccagaag
catgctattcccatcatcaagaccaagagggacctgatggcctgcgctcaaactggctct
ggtaagactgctgccttcttgctcccagtgctgagtcagatttacacagatggaccagga
gatgctctgcagacctcaaagaacagtggacaggacaatggaaggtatggccgtcgtaag
cagtatcccctctcccttgtcctggctccaaccagagagctggcattacagatctacgat
gaggcgaggaagtttgcctatcgctctcgtgtgcgtccctgcgtggtttatggtggtgct
gatattggccagcagatcagggacttggagaggggctgtcatctgttggtggccacacca
ggacgtctggttgacatgatggagaggggcaagatcggtctggatcactgcaattacttg
gtcttggatgaggctgaccgcatgttggacatgggtttcgagccccagatcagacgaatt
gtggagcaagatacaatgccaccaaaaggaattcgtcagaccatgatgttcagtgccact
ttcccgaaagagattcagatcctggctcgtgacttcctggaggactacatttttctggca
gtaggccgtgttggctccacttcagaaaacatcacccagaaggtggtctgggtagaggag
actgacaagaggtcctttcttctggacctgctcaacgccacaggtaaagactctttgact
ctagtgtttgtggaaaccaagaaaggagctgatgctctggaagactttctttatcgagag
ggctacgcctgcaccagcatccatggtgatcgatctcagagagaccgggaggaagctctg
catcagttccgctctggacgctgcccaatcttggtggctacagctgtggctgctcgcggt
ttggacatctccaacgtaaagcatgttattaactttgatttgcccagtgacattgaggaa
tacgttcaccgtattggccggacgggacgtgtgggcaaccttggtctggccacgtcgttc
tttaacgacaaaaacagcaacataaccaaagatttgctggacatcctggttgaggccaag
caggaggttccttcttggcttgagagcctggcctacgagcaccagcacaagagcagcagc
cgtggccgctctaagaggttctcaggcggatttggagccagagactaccgtcagacacca
ggcggttctggaggcttcaacagcaaccgtgcagggcgcagcgctggaggaaaccgtggc
tttggtggaggtggcttcggtggcaacttctacaacagtgatggctatggaggaaattac
aaccactctggtagtgtggattggtggggaaactag |
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