Kryptolebias marmoratus (mangrove rivulus): 108243817
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Entry
108243817 CDS
T05608
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04137
Mitophagy - animal
kmr04144
Endocytosis
kmr04145
Phagosome
kmr04148
Efferocytosis
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108243817 (rab5c)
04145 Phagosome
108243817 (rab5c)
04137 Mitophagy - animal
108243817 (rab5c)
04148 Efferocytosis
108243817 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108243817 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108243817 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108243817 (rab5c)
04031 GTP-binding proteins [BR:
kmr04031
]
108243817 (rab5c)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
108243817 (rab5c)
Endosome - Lysosome transport
108243817 (rab5c)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108243817 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
108243817 (rab5c)
Exosomal proteins of colorectal cancer cells
108243817 (rab5c)
Exosomal proteins of bladder cancer cells
108243817 (rab5c)
GTP-binding proteins [BR:
kmr04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
108243817 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_16
MCR_beta
B12-binding
SDR-like
Motif
Other DBs
NCBI-GeneID:
108243817
NCBI-ProteinID:
XP_017284997
UniProt:
A0A3Q3BB00
LinkDB
All DBs
Position
LG12:complement(5306462..5316589)
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLSNKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGAGGRARGGVDLQEAAPQGRSSQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgaggcggaccggcacggaccaacggcactgccgcaagcaacaagatctgt
cagtttaagctcgtgctgttgggagaatcggcggtgggaaagtccagcctggttctgcgc
ttcgtcaaaggccagttccacgagtaccaagagagcacgatcggagctgccttcctcaca
cagacggtatgtttggacgacacaacagtcaagtttgagatttgggacactgcgggacaa
gagcgatatcacagcttggcacctatgtactacagaggagcccaggccgccatcgttgtc
tttgatatcaccaacacagatacattcacacgtgcaaaaaattgggtgaaggagctccag
cgacaagccagtcccaacatcgttattgcactggcaggaaacaaggcagacctgtccaac
aaaagagccgtagatttccaggaagcacaagcgtacgcagacgacaacagtttgctcttc
atggaaacttcagccaagactgctatgaatgttaatgagatttttatggctatagccaag
aagcttccgaagaacgagcctcagggtggagcgggcgctggtgggcgagccagaggcggc
gtggacctgcaggaggcggcgccgcagggcagaagcagccagtgctgtgggggcgggaac
taa
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integrated database retrieval system
