Kryptolebias marmoratus (mangrove rivulus): 108243866
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Entry
108243866 CDS
T05608
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X6
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108243866 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108243866 (kcnma1a)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
108243866 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
108243866
NCBI-ProteinID:
XP_017285120
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Position
LG22:15263054..15398053
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AA seq
1269 aa
AA seq
DB search
MLAEADGTVPHGSDGSMRTSGINSNINPDSSILISKMEDVVIPFSSEVPCDDNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEARKVNNPANNQAADKTTKGPDE
KEEAAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFGNSQSLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEFKSEQRESRSRKRILINPGNHVKLQDGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLQRAYP
LSSVSVHDCATTLRAFEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQI
ENMDMNVKRYDSTGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRN
LVMPLRASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINL
CDMCVILSANQNNIEDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRTSP
DSSPVHGFVRQASVTTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFA
VSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCR
VAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLTMPSQCTKRYVITN
PPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSVPASNRQNRSS
KSREARDKQNATRMNRMSQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIP
PIREVEDEC
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgctagccgaggcggatggcacggtcccccatggcagcgacggctctatgaggacaagc
ggaatcaacagcaacatcaacccggactcctcgatcctaatatccaagatggaagacgtt
gtcatcccgttctcatccgaggtgccgtgcgacgataatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgttcttcgggggtctcttcatcatcctcctgtggagg
accctcaaatatctgtggactgtttgctgccactgcaacattaaaaacaaggaggctcgg
aaggtgaataatcctgccaacaatcaggcagcagacaagacaacaaagggtcctgatgag
aaagaggaggcagcagccagtgaggtgggatggatgacttcagtcaaagactgggccgga
gtcatgatttctgctcagacactcactggcagagttctggtggtgttagtctttgcactc
agcattggggcccttggaatatacttcatagactcctcagatcctatagaatcctgccag
aacttctacaaagattttacgctacagatcgacatggccttcaatgtcttcttcctcctt
tattttggcttgcggtttatagcagccaatgacaagctgtggttctggctggaggtcaac
tctgtggtggacttcttcacagttcctcctgtgtttgtctctgtgtacttaaacagaagc
tggcttggtttaagatttctgagggcactaagactgattcagttctcagaaatattacag
ttcttaaatattttgaaaacaagcaattccatcaagctggtgaacttgtgttccatcttt
ataagcacttggctcacagctgctggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttcggaaattcccagtcgttatcttattgggaatgcgtctacttgctgatg
gtgactatgtcgacagtgggctacggggatgtctatgcaagaaccaccttgggccgcctg
tttatggtcttcttcatcctcggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatatcaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccattttacccaagtagagttctaccag
ggatctgttctcaaccctcacgatttggctcgagtgaagatcgagtctgcagatgcctgc
ctaattctagccaacaaatattgtgcagatcctgatgctgaagatgcctccaacatcatg
agggtcatatccatcaagaactaccacccaaagatcaggataatcacacagatgctacag
tatcacaataaggcccatctgttgaacattccaagctggaactggaaggaaggtgatgat
gctatttgcctggcggagctgaaggcaggcttcattgcccagagttgtttggcccagggc
ctgtcgacgatgctagccaatctcttctccatgaggtcatttattgagattgaggaggac
acatggcagaagtattaccttgaaggagtggctaatgagatgtacacagagtacttgtcc
agtgcctttgtaggcctctccttccccactgtgtgcgagctgtgctacgtgaagctgaag
ctgttgcttattgccattgaatttaagtctgagcagagagagagcagaagccgaaagcgc
atcctcatcaacccgggcaaccatgtcaagttgcaggacggaacactgggattctttatt
gctagtgatgccaaagaagtaaagagagcatttttctactgcaaagcttgtcatgatgac
atcacggaccccaaaaggattaagaagtgtggctgcaaacgactgatttattccaagatg
tccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcgagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctaccca
ctttcctctgtctctgttcatgattgcgcaaccactttacgtgcctttgaagacgagcat
ccgtcaactctctcgcccaaaaaaaagcagcgcaatggagggatgcggaactcacccaat
tgctctcccaaaatgatgagtcgacatgacccccttctaattcctgggaatgagcaaatc
gagaacatggacatgaatgtgaagaggtacgactcgactgggatgtttcactggtgccct
tccaaggaaatcgaaaaggtcatcctgacccggagtgaggcctccatgactgtgctgagc
ggccatgtagtggtctgtatatttggggatgtcacgtctgccttagtggggctgcgaaac
ttggtgatgcctttaagagccagcaatttccactaccacgagctaaaacctatagttttt
gtgggctcgctggactaccttcggagagagtgggaaactttacacaacttccccaaggtt
tccatcttacctggtacaccattaagtcgggcagatttaagggctgtcaacatcaacctc
tgtgacatgtgcgtaatactgtcagccaatcagaacaatatcgaagatgcctcactgcag
gataaggaatgcatcttggcatcactcaacatcaagtctatgcagtttgatgacagcatt
ggggtcttacaggctaattcccaaggtttcacgcctcctggaatggacaggacatctcca
gacagcagtccagtacatggctttgttcgtcaggcatctgtgactaccggctccaacatc
cccatcatcactgaacttgtgaatgactcaaatgttcagttcctggaccaagatgatgac
gacgatccagacacagagctgtacctcactcaacccttcgcctgcggcactgcctttgct
gtcagtgtactcgactccctgatgagtgcgacatacttcaacgacaacatcctcacacta
atccggacactagtcacagggggagccactccagagctggaggccctgttagctgaggag
aacgctctcagaggaggatacagcacaccacaaacactagctaacagagacaggtgtcgc
gttgcccagctagccctctacgatggcccgtttgctgacttgggggatggtggctgctac
ggggatttattctgtaaagcactgaagacatacaacatgctgtgttttggaatctacaga
ctacgagatgctcatctcaccatgccaagccagtgcacaaagcgatatgtgatcacaaac
cccccatacgagtttgagctcgtgcccacagacctgatcttctgtcttatgcagtttgac
cacaacgctggccagtcaaggacaagcttatctcactcctcccattcctcccattcctcc
agcaaaaagagctcctctgtgcactctgtacctgcctccaaccggcagaaccgcagcagt
aagagcagggaggcccgtgacaaacagaatgcaacaaggatgaatagaatgagccaagaa
aagaaatggtttacagatgaacccgaaaatgcctacccaaggaacattcagattaagcct
atgagcactcacatggccaaccaagtcaaccaatacaaatccactagtagcctgattcca
ccgatcagagaagttgaagatgaatgctga
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integrated database retrieval system
