Kryptolebias marmoratus (mangrove rivulus): 108243886
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Entry
108243886 CDS
T05608
Symbol
bop1
Name
(RefSeq) ribosome biogenesis protein bop1
KO
K14824
ribosome biogenesis protein ERB1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108243886 (bop1)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108243886 (bop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
DUF4785_1st
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
108243886
NCBI-ProteinID:
XP_017285104
UniProt:
A0A3Q3EJY9
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All DBs
Position
LG5:complement(5544379..5550449)
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AA seq
747 aa
AA seq
DB search
MEGNRENVQIIEKRPGMKKKEKTDKKRSLEDEQEDQLIDFNKKPVNKDEDDEDLSDSEDS
IYSGLEDSGSDSEEDEEEGSDDDGGDVDDNAEDQSLEAEVKKIEEEEEESEEKEVKREDE
YQHDSSDEEDIRNTVGNIPMEWYKDFPHIGYDLDGKKIYKPIRNKDELDEFLDKMENPDY
WRTVHDKMTASDIVLSDEQVDLVNRLQRGQFGDVNFNEYEPTVEFFSKDVMIHPVTNRPA
HKRSFIPSLTEKEKVSKLVHAIKMGWIKPRRVEDDSKGRYYDLWASEDSSISAKHKMHLP
APKIPLPGHEESYNPPPEYLFTEEEQSLWDQQDPIDRKLTFIPKKFDSLRQVPAFSRFIH
ERFERCLDLYLCPRQRKMRVNVNAEDLIPKLPKPKDLQPFPTTQSLVYRGHSGLVRSISV
SPSGQWLASGSDDGSVRLWEVCTSRCMKTIQVGGSVKSIAWNPNSSVCLLAVAVNSEVLI
LSPALADRQVVSSSERLLAAPQEEGPSEESDTAVWSEAEGEELNQGIRLKIQHPKPVHQV
TWHAKGNYLASVMPDHSSHLQVFVHQVSRRRSQNPFRKSKGLVQCVSFHPIRPYFFVATQ
RSVRIYNLVKQEMTKKLQANSKWISSIAIHSGGDHVICGSYDCRLSWFDLDLSTKPYKML
RHHKKAVRSVAYHKGYPLFASASDDGSVIVCHGTVYNDLLQNPLIVPVKVLRGHAITHNL
GVLDVTFHPTQPWVFSSGADATIRLFT
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaacagggaaaacgtgcagatcatcgagaagagaccagggatgaagaagaag
gagaaaacagacaagaagaggagtttagaggacgaacaggaagatcagctcatcgatttc
aacaagaaacctgtcaataaagatgaggacgatgaagatttatcagacagtgaggacagt
atctactccggactggaggattctgggagtgactcggaagaagacgaggaggagggatca
gatgatgatggtggtgatgtagatgataatgcagaggatcagagtctggaggcagaggta
aagaagattgaggaagaagaagaagagagtgaagaaaaggaagtgaagagagaagacgag
tatcaacatgacagctcagatgaggaggacatcagaaacacagtgggcaacattcccatg
gagtggtacaaagatttccctcacattggctatgatctggatgggaagaagatctataag
ccaatcaggaacaaggatgagcttgatgagttcttggacaaaatggagaatcctgattat
tggagaacagtccacgacaagatgacggcaagcgacattgtgctgtcagatgagcaggta
gacctggtgaatcgtctgcagagaggacagtttggagacgtcaactttaatgagtatgag
cccacagtggagttcttcagtaaagatgtgatgattcatccagtcacaaacagacctgca
cacaaacgcagcttcatcccgtcgttgactgaaaaggagaaagtctccaaactggtgcat
gctatcaaaatgggttggattaaacctcggcgggtggaggatgacagcaaagggcgctat
tacgacctgtgggccagtgaggactcttctatttcagccaagcacaaaatgcaccttcca
gcccctaaaattcctctgcctggtcacgaggagtcgtacaaccccccacctgagtacctg
ttcacagaggaggagcaatctctgtgggatcagcaggatccgatagacaggaagctgacc
ttcattcccaagaagttcgacagcctccgtcaggttccagcgttttctcggtttatccac
gagaggtttgagcgctgtctcgatctttacctgtgtccccgacagagaaagatgagggtg
aatgttaatgctgaagatctgattcccaaacttcccaaaccaaaagatctgcagccgttt
ccgacaactcagtctctggtgtatcggggtcacagtggtctggttcgctccatcagtgtg
tctccatcaggacagtggctcgcttcaggtagtgatgacggttctgtcaggttgtgggag
gtgtgtacatctcgctgtatgaaaacgatccaggtggggggatctgtgaagagcatcgcc
tggaacccaaactcgtctgtctgtctcctggctgttgctgtgaactcggaggtcttgatt
ttgtctcctgctctggcagacagacaggtggtctcgtcgtcagagcgacttcttgctgct
cctcaggaggaggggccttcagaagagtcggacactgctgtctggtctgaagctgagggg
gaggagctaaatcagggcatccgtctcaaaatccaacatcctaaacctgtccaccaggtg
acgtggcatgccaaaggaaactacctggcttcagtgatgcccgaccattcgagccacctg
caggtgttcgtccaccaggtcagccggaggcggagccagaatcctttcaggaagagcaaa
ggcctcgtccagtgtgtgtccttccaccctatcaggccctacttttttgtagccacccag
cggtctgtcaggatctacaacctggtcaaacaggaaatgaccaaaaaactacaagccaac
tccaaatggatctccagcatagccatccactcggggggtgatcatgtgatctgtgggagc
tacgactgcaggctgagctggttcgacctcgacctctcaacaaaaccctacaagatgcta
cgacaccataagaaggcggtgaggagtgtggcctatcacaaaggttaccctctgtttgcc
tcggcgtcggatgatggatcagtgatcgtctgtcacgggactgtttacaacgacctgctg
cagaacccgctgatagtgcctgtaaaagttctcagaggtcacgcaatcactcacaacctc
ggtgttctggacgtgacctttcaccccacgcagccttgggtcttctcctccggagctgat
gccaccatccgactattcacctaa
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