Kryptolebias marmoratus (mangrove rivulus): 108243906
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Entry
108243906 CDS
T05608
Symbol
rfx5
Name
(RefSeq) DNA-binding protein RFX5 isoform X1
KO
K08061
regulatory factor X 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108243906 (rfx5)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Other basic domains
RF-X
108243906 (rfx5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
108243906
NCBI-ProteinID:
XP_017285130
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All DBs
Position
LG5:complement(5130978..5143605)
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AA seq
703 aa
AA seq
DB search
MSEDQRHQRAEASQQAKGGLEAAEGDTEPSMLLQKLKSNISKNVQTKVDQILQDVQRFSD
NDKLYLYLQLPSGPSCGDKSVLSCFWTSGGDSSSFNTADQLHTCNWIRSHLEEHSDTCLP
KQDVYETYKRYCENLQHRPLSAANFGKIIRDIFPNIKARRLGGRGQSKYCYSGIRRKTVL
NMPLLPNLDLKNDPSELTELVQTYKQEVTEAACELICDWAQKILKRSFDTVVEIARYLIQ
EHIVNPRCSQAELVTSAALAGGPAKTHKVIKKTPGVSKADGDGAAEQKKDLGDLSLSSSS
QKLPSGDKSAAAAKPSAADAPPPSSTSSSSLRPAVEAFMKQLPRILPRSCVPEKSLSVHS
SLPSQAPKDASGVGGPSGHGGSADLHPAAGSGGVKVIAMATLPQQQGGPVPVMFLPQSCL
SFERDKVAPPAPLPLQQQQHTVAAPTSVVQKARGAAAKRPLEGETSGGGPASAVSTSPVK
RKRGRPRKPRPEDSLPAPPVNLPPQPPPAPSQPPIITSITGGVIQKASSSSSSSQPVVEL
VIQEPSGLVLSQLPAVSDPAHRLLEHRGVVVQCQTGGTAELDHHSRPLLVFQSPGNPGWE
LASSSRTPMVEVIQKAPRPNNNNSTAAPQAAQLHSPPLPLPTLQEEQGEVEIMLMPVDLN
VSSPPSSSSSTAPASSCSVPPQVVVKLEDEEEGNGISSKREEL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaccagcgccaccagcgggccgaagcctcccagcaggcgaagggcggtctg
gaagcagcagagggcgacacggagcccagcatgctgctgcagaaactaaagagcaacatc
tctaaaaatgttcagaccaaagtggatcagatcctgcaagacgttcagcgtttctctgac
aatgacaagctgtacctgtacctccagctgccctcggggcccagctgtggagacaaaagc
gttttgtcttgtttctggaccagtggcggtgactccagttcgttcaacacggccgaccag
cttcacacctgtaactggatccggagtcacctggaggagcattcagacacctgtctgccc
aaacaggacgtctacgagacgtacaagagatactgtgagaacctgcagcatcgtcctctg
agcgccgccaactttgggaagatcatcagagacattttcccaaacatcaaggcgagacga
ctcgggggcagaggacagtccaagtactgctacagcggcatcaggaggaagaccgttctt
aacatgcctcttctgcccaacctggacctaaagaacgacccgtcggagctgaccgagctg
gtccagacctacaaacaggaagtgacggaggcggcgtgtgagctgatctgtgattgggcg
cagaagatcttgaagcgctccttcgacacggtggtggagatcgctcgctacctgatccag
gagcacatcgtcaaccctcgctgcagccaggccgagctggtgacgtctgctgccctcgca
ggaggtccggctaaaacccataaggtcatcaagaaaactcctggggtctctaaggctgat
ggagacggagctgcggagcagaagaaggatctgggagacttgtccttgtcctcgtcctca
cagaagcttccgtctggagacaagtcggcagcagcagccaaaccttccgcagcagacgct
ccgcctccttcctctacctcttcctcgtctctgcgtccagcggtggaggcgttcatgaag
cagttacccagaatcctccctcgcagctgcgtccctgagaagagcctctctgtccactcg
tctctgccctcgcaggctcccaaagatgcctccggtgttggagggccctctggacacgga
ggctccgctgaccttcaccccgctgccggcagcggtggggtgaaggtcattgccatggca
acgctgccccagcagcagggcgggcctgtccccgtgatgttccttcctcagagctgtctg
tcctttgagagggacaaagttgctccgcctgctcctcttcctcttcagcagcagcagcac
acggtggcggctcccacctctgtggtccaaaaagctcgaggggccgccgccaagcgcccc
ctggagggggagacgtcaggtggcggtcctgcctctgctgtcagcacgtctccggtgaaa
cggaaacgaggacgaccaagaaaacctcgtccagaggactcacttcctgctcctcctgtc
aatcttcctcctcagcctcctcctgctccctctcagcctccaatcatcacctccatcacc
ggcggcgtcatccagaaggcgtcttcctcctcgtcctcctcgcagcctgtggtggagctg
gtgatccaggagccgtcggggctggtcctgagccagctgccggcggtgtcagacccggct
catcggctgctggagcaccgcggggtggtggtgcagtgtcagacgggcgggacggctgag
ctggaccaccacagcaggccgctcctggtgttccagagtcccgggaaccccggctgggag
ctggcctcgtcaagtcggacccccatggtggaggtgatccagaaagctccgcggccgaac
aacaacaacagcacggctgctccacaggcagcgcagctccactcgcctcctctccccctg
cccacgctgcaggaggagcagggcgaggtggagataatgctgatgcccgtcgatctgaat
gtcagctcgcctccttcctcctcctcctccactgctcctgcctcctcctgctccgttccc
ccccaggtggtggtgaaacttgaggacgaggaagaaggaaacggcatctcctcaaagaga
gaagaactttag
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