Kryptolebias marmoratus (mangrove rivulus): 108243950
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Entry
108243950 CDS
T05608
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108243950 (lrp12)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108243950 (lrp12)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
DASH_Dad3
Motif
Other DBs
NCBI-GeneID:
108243950
NCBI-ProteinID:
XP_017285208
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All DBs
Position
LG5:complement(5529458..5537757)
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AA seq
874 aa
AA seq
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MALRADCRQSLVYLIILAGSIAASQRNDNVYVSGFSNGCGDVAELLRASSGIITSPGWPF
QYPARLNCSWNIRARPGDSITVSFQDFDLQGSHHCTSDWMSISSYRSLDGLRVCGSSLPP
PYISSQDHVWIHFHSDDTLTGKGFRLSYISGKPEASSCDVDQFHCSNGKCIPDWWRCNSM
DECGDNSDEELCVDSPFSFQPCNLNQFPCLSRYTRIYTCLPHSLRCDGSIDCQDLGDEID
CDVPTCGEWLRNFYGSFSSPNYPDFYPPGSNCTWLIDTGDHRKVILRFTDFKLDGTGYGD
YVKVYDGLEENPRRLLRVLTAFDSRAPVAVVSSSGQLRIHFYADKINAARGFNVTYQVDG
FCLPWEVPCGGNWGCYTEQQRCDGYWHCPNGRDELNCSSCQEDEFPCSRNGACYPRSDRC
NYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGSDEESCPIIVPTRV
ITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQLI
AQGLIPPVEDFPVCSGSQASVLENLRLAVRSQLGFTSLRLPSSGRRSNLWRRLFTFSRSR
RSGSLALVSADLEDSSGTGSTGSSGSDLLSPDSDDTDTEGERGRERGVGAVGGPVAPLPQ
KTPPPSAVEAVVSVTASATSVTPTPSRDRGRDRSREAPPPSSPVTVVTSSPDPECRSDAS
ELQASSSSTLQRLAQNLHRLARNLTRTNQNQQNQTWTNHSPLRQLETGRSSADTAERRES
REEEEDVELLIPASDSDSSSSSSLVSDMRQPLLEPHPSSTTGLAPHHHRGHSGRGGRDGT
CEHCGMVHTAQIPDACLEATGKTESSDDELLLLC
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggccctcagagcagactgcaggcagagtctcgtctacctgatcatcctggcaggatcc
attgctgcttctcagagaaatgacaacgtctatgtgtctggattttctaatggttgtggc
gatgtggcggagctcctgcgggcgtctagcggcatcatcaccagccctggttggcccttt
cagtacccggctcggctgaactgcagctggaacatacgagcacgacccggagactccatc
actgtcagtttccaggactttgacctccagggttcccatcactgcacttcagactggatg
tccatcagcagctacagaagcctggacggcctgcgggtttgtggttcgtcgctgccaccc
ccttacatctcctcccaggaccacgtctggatccacttccactctgatgacaccctgacg
gggaaaggtttcagattgtcctacatctccgggaaaccggaggcatccagctgtgacgtc
gaccagttccactgctctaatgggaagtgcatcccagactggtggcgctgtaactccatg
gacgagtgcggtgacaattcagatgaggagctgtgtgtggattcaccattctccttccag
ccctgtaatctgaaccagttcccctgcttgtcccgttacacccggatctacacctgcctg
ccgcacagtctgcgctgtgacggcagcatcgactgccaggaccttggcgatgagatcgac
tgtgacgttcccacttgtggcgagtggttaaggaacttctacggttccttcagctctccg
aactacccggatttttaccctccaggaagtaattgcacatggctgattgacaccggagac
caccgaaaggttatcctgaggtttacagactttaagctcgatgggacgggttacggtgat
tatgttaaagtttacgatggtcttgaggaaaaccctcggcgcctcctcagggtgctgact
gcgttcgactccagagcaccagtcgctgtggtttcatcttctggtcagctcagaattcac
ttctatgctgacaagatcaacgctgccagaggattcaacgtcacctaccaggtggatggg
ttctgcctgccctgggaggttccctgtggaggaaactgggggtgttacacggagcagcag
cggtgcgacggctactggcactgtccaaacggtcgggatgagctgaactgttcgtcctgt
caggaggacgagttcccctgttccagaaacggagcctgctaccctcgctcagaccgctgc
aactaccagaaccgctgccccaacggctctgacgaaaagaactgcttcttctgccagcct
ggaaacttccactgcaagaataaccgctgtgtgtttgagtcgtgggtttgcgacgctcag
gacgactgtggtgacggcagcgatgaggaaagttgccccatcattgttcccaccagagtc
attacagcagccgtcatcggcagcctgatctgcggcctcctgttggtcatcgccctcggc
tgcacctgcaaactctattcgctgcgcatgttcgaacgcaggtcgtttgagacccagctc
tccagagtggaggcggagctgctaaggcgggaggctccgccctcttacggtcagctgatt
gcacagggactgattccaccagttgaggattttccagtttgctctgggagtcaggcatct
gtcctggaaaacctccgtctggctgttcggtctcagcttggcttcacctccctcagactc
ccctcctccggtcgtcgtagcaacctgtggcgcagactcttcaccttctcccgatcccgc
cggtctggttctttggctctggtctctgcggacttggaggacagctctggtactgggagc
actgggagttctggctccgatctgctgtctccagactctgatgacacggatacagagggt
gagcgagggagggagcgaggtgtgggtgcggtaggtgggcctgttgcccccctccctcag
aagaccccacccccctctgctgtagaggctgttgtgtcggtgacggcatctgcaacctct
gtgaccccaacgccaagccgagaccgaggccgcgaccgctccagagaagctccgcccccc
tccagccctgtcactgtggtgacctctagtccagatcctgaatgtcgcagtgatgcttca
gagctccaagcttcttcctcctctaccctgcagcgcctggcccagaacctacaccgcctc
gctagaaacctaacccgaactaaccagaaccagcagaaccaaacctggaccaatcacagc
ccactccgccagctggagacaggaagaagcagcgctgataccgccgagcgacgagagagc
agagaggaggaagaagatgtggagctcctcatccctgcctccgactctgactcgtcctcc
tcttcctctctggtcagtgacatgcgacagcctctcctggagccccacccctcctccacc
acaggcctggccccccatcatcaccgtggacacagtggtcgaggagggcgggatggcaca
tgtgaacactgtgggatggtccacacggctcagatccccgacgcctgccttgaggccacg
ggtaagacggagagcagcgacgacgagctgctgctgctgtgctaa
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