Kryptolebias marmoratus (mangrove rivulus): 108243952
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Entry
108243952 CDS
T05608
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108243952
NCBI-ProteinID:
XP_017285211
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Position
LG5:complement(4773810..4914963)
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AA seq
1163 aa
AA seq
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MAPTDWLWWPLLLLLRLTLLLTSCFVSESVSTTSFPKDLEPLNVVNSEQSYQYPGFQGLL
QDNDTLRLGLDFQRMLRINHMLYIAARDHVFAVNLTTASEEFVPQLKLTWKSTDVSKCTV
RGKNSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTSLELVGEEVVGQARCPFES
SQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGEGRPVLRTVKYDSKWLREPHFLHAIDY
GNYVYFFLSEIAVEYTALGKVVFSRVARVCKNDNGGSPRVLDRYWTSFLKARLNCSVPGD
SFFYFDVLQSLTNVLQINQRPAVIGVFTTQANSIPGSAVCAFYMDDIEKVFNGKFKEQRT
SDSSWTPVPDESVPRPRPGTCAGDGQASDYKSSVQFPDEMLTFIKSYPLMDEAVPSVNDR
PCFTRTSSRSKLTQIVVDVSAGPHKDRTVMFLGSDDGRVLKVLASTHPNDSFGSKLLEDI
DVYNPSKCNVQGQEDRRVLGLELDKDHHALFVAFTSCVIRVPLSRCTQHGACKRACLASR
DPYCIWLRTGSCANMAPGFKAGFEQDIEGDHSFYSNSCHTDVLATTRNQESAADSAYGVR
RLPEIEQRASANVHYTLLIACVLVAFFLGAILSGFLVSCYCSRSGSHRARRLGKDPEASL
PHALSLRSLAKLNGLLEGQPKDEKLDVSTPKMYSSFIPNGRAEPHLHTPGHQGLQLGDPD
LNLSQSLSQADGELSGLPTPDSTPELPIKSMRALRHHQYEKNQNCNNAAKDNKSAPSCSA
SSQGFMAVVGNSLSQQVFPFSHQTGNSLSNGAAHGAGASSTSLHLPEERKLSSDERAAAG
GAAAGGGGGGGGGGSHHHHSQQSLPQTVVDVSALDELLKHIHEVSASGTGGIKVLTSTSS
SSLFPGPSSSGGHHHNHHHHNHHSQTRTHHYNHSHHHSNHHNNNSSSTHHHQQPIPETES
TSYYSTSTLPRDGLPKHLDAAPQNSNSSSATSSSSSSSSSNNPTSSTSIPSSSSSSSSTP
LQQQVIPERPEGGGVSVARHQSQRHSLIKMGAAGGAVPRHHSFNQRGAHAHFLARMNTNS
SSNGPPGATAMANTNTSNNNESQRASIASACLTRQHSYSEGPYAQRAAVVRRTVSLKPQV
PPKPLFLPNTATSSVTEAGKYNY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaccgactggctgtggtggcctctgttgttgctgttgaggctgacgctcctt
ctcacttcctgttttgtgtccgagtcggtctcaacaacatccttcccgaaagacctggag
ccgctcaatgtggtcaactcagaacagtcgtatcagtatccaggatttcagggtttgctt
caggacaacgacactttgcgactgggactagattttcagagaatgttacggatcaatcat
atgctgtacattgcagccagggatcatgtgtttgctgtgaacctgacgacggcttcagaa
gagtttgtcccgcagctgaagctgacatggaagtccacagacgtcagcaagtgcacggtc
agaggaaagaacagcgatgagtgctacaactacgtgaaagtgctggtgcctcgaaacgat
gagactctttttgcctgtggtaccaatgctttcaacccaacctgtcgaaactacaagatg
acgtctctggagctggttggggaggaagtggtgggtcaggctcgatgtccgtttgagtcc
agtcagtccaacgttggcttgtttgctggaggagatttctattcagccaccatgacagac
ttcctcgccagcgacgccgtcatctacagaagtctgggggaaggccgacccgtcctcagg
actgtcaaatatgactccaagtggctccgagagcctcacttcctgcacgccatcgactat
ggtaactacgtctactttttcctgagtgagatcgcagtggaatatacagccctgggcaag
gttgtattttctcgagtcgcccgagtctgtaagaacgataacggaggatctcctcgggtt
ctggacagatactggacttctttcctaaaagcacgattgaattgttcagttcctggagac
tccttcttctactttgacgttcttcagtctctcaccaatgtgctgcagatcaatcagaga
cctgcggttatcggagtcttcaccactcaggccaacagtatcccaggctcagcagtgtgt
gccttctacatggacgacattgagaaagttttcaatggaaagttcaaagaacagagaacc
agtgactcatcctggactcccgtaccagacgagagtgttcccagaccgaggcccggtact
tgtgcaggtgacggtcaagcttcagattacaaatcttcggtacagtttcccgatgagatg
ctgaccttcatcaagtcatatcccctgatggatgaagctgtaccctcagtcaacgaccgg
ccctgcttcacccggacctccagcaggtccaagctgacccagattgtggtggatgtttca
gccggcccccacaaggaccggacagtgatgtttctcggctcagacgatggacgagtcctc
aaagtgttggccagcacacatccgaatgacagctttggatccaaattgctggaggacatc
gacgtctacaatccttcgaagtgcaacgttcagggtcaggaggacaggagggttctgggc
ttggagctggataaagatcaccacgctttgtttgtagcgttcaccagctgtgtcattaga
gtaccactcagccgctgcacccaacacggagcctgtaaaagagcctgccttgcctctcgg
gatccatactgcatctggcttcgcaccgggagttgtgccaacatggcgccgggcttcaag
gcggggtttgagcaggacatcgaaggcgaccattcgttttactccaacagctgtcacact
gatgtgctggcgacaacacggaaccaggagtctgcagctgactctgcttatggcgtccgt
cgccttcctgaaatcgagcagcgtgccagcgctaacgtccactacaccttgctgatcgcc
tgcgtgctggtggcattctttctgggcgccatcttgtcgggtttcctggtgtcgtgttac
tgcagccgcagtggctctcaccgggctaggaggctgggcaaagaccccgaggcgtcgctg
cctcacgctctgtcgctgcggtccctcgccaagctgaacgggctgctggagggacagccg
aaggatgaaaaactggatgtatcaacaccgaaaatgtacagctccttcatccccaacggc
cgagcagagccccacctccacacccccgggcaccagggtctgcagctgggagacccggac
ctcaacctgtcccagtctctgtctcaggctgatggagagctctccggcctgcccacgcct
gactccaccccagagctccccattaagagtatgagggccctgcggcatcaccagtacgag
aagaaccagaactgtaacaacgccgccaaggataacaagtcggctcccagctgctctgca
tccagtcagggttttatggctgtcgtagggaactctttaagtcagcaagtgtttcctttt
tctcatcaaactggcaacagtttgagcaacggagcagcccacggggcaggcgcctcctcg
acctcgctgcacctccccgaggagaggaagctctcaagcgatgagcgtgcagcagcagga
ggagcagcagcaggaggaggaggaggaggaggtggtggaggttcacatcaccaccactcc
cagcagtccctccctcagacggtggtagacgtgtccgcactggacgaactgctcaaacac
atccatgaagtcagcgcgtcgggaaccgggggcatcaaggtcctgacgtccacctcctca
tcctctctgtttcccgggccgtcatcctctggaggacatcatcacaatcaccatcaccac
aaccaccacagccagacccgcacacaccactacaaccacagccatcaccatagcaaccat
cacaacaataacagcagcagcactcaccatcaccagcagccgatcccagaaacagaatcg
acttcgtattacagcacctccacgctgccgagggacggcctccccaaacacctggacgca
gctcctcaaaactccaactcctcctctgccacatcctcatcttcctcgtcctcatcctcc
aacaaccccacctcctccacctccatcccttcttcatcctcctcctcttcctccactccc
ctccagcagcaggtgatcccggagcgacccgaagggggcggagtctctgtggcacgccac
caatctcagcgccactccctcatcaagatgggcgcggcgggcggagccgtccctcgccat
cacagctttaaccagcggggggcgcatgcacacttcctggccaggatgaacaccaacagc
agcagcaacggccccccaggcgccacggcgatggcgaatacaaacaccagcaacaacaac
gagagccagagagcatcgatcgccagcgcctgcctgacacggcagcacagttacagcgaa
gggccttatgcgcagcgggcggctgtcgtccgcaggactgtgtccctaaaaccgcaagtc
ccgccaaaaccactttttctgccaaacacagcgacgtcttcagtaacagaagcaggaaaa
tacaactactaa
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