Kryptolebias marmoratus (mangrove rivulus): 108243970
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Entry
108243970 CDS
T05608
Symbol
elp1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108243970 (elp1)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108243970 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
TPR_GEMI5
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108243970
NCBI-ProteinID:
XP_017285249
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All DBs
Position
LG9:complement(28322768..28359143)
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AA seq
1334 aa
AA seq
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MRNLKLLKSLGSSELQGLGSPQRFCVRADSGSLLVASQFSITEFEPRTGQVVCEASLTAD
GFLPEDGSGVVVGLQDLAELQSACLATAGGDVVLFNLNTNQLECVGSVDSGLTSMSWSPD
EELVVLTTGQETIIMMTKDFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKQAAQ
RKTQQVQPAVAWDDRRPRVTWRGDGQLFAISAICPQTGARKVRVWNREGVLQTTSEPING
LEQALCWKPSGNLITSTQRHPNKHSVVFMEKNGLLHGDFTLPLSRDQAKVKELLWNNDST
VLTVWLEDLTAGEDGHVNTYIQLWTVGNYHWYLKQSLDFGRDPQKAPVHVCWDPERPLRL
HVVTYNWTCFAYDWGWTTERSPGVDGSDHAGVAVIDGDKVLVTTFRQSVVPPPMCSFELQ
LKSPVNQVTFLHRPKGTNQIAAFTVDGQISVFSQDSGQAEVTTDGFKTVSRPLVLQKTFR
FPVPQDEPLALRQLLWLQDELFLAVSSGLLPTSSTLLILHADQDAGDTLAVRSRVEVDGV
VVSVVHSSQTGTVAFQLEDGQIRKLLWDCPEPSAEDWCDSSGCRISFPVPCVQTALCSIS
GAEYLLGLTDRSHLYAGDTELASNVCSFAVCDDFLLISTHSHTCRCLQLSTLTVKGLQAA
LASDGGQNDETLRRVERGSRIVTVVPQDTRVVLQMPRGNLETVHHRALVLAQLRKWLDEL
RFREAFECMRKLRINLNLIYDHNPKVFLENIETFITQLNSINSINLFLTELREEDTSCSM
YPRPDSGPAQTQPTQKKVDVVCDALRSAMESMDPNKFCLSVLTAHVKKTVPELEIALQKV
HELREDPPEAPGSVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDPKEYL
PFLNMLKSLEPNYQRYTIDKHLKRYRKALVHLTKCGEEHFPEVLSLVKEQKLYSEALRLY
AADSPQFKFLSCGYAEHLMEQQQAEQAGLLLWRCGEPVRALQAFTISSSWRNTICVAQQI
PLPPDQLALLARDLAEKLTEQRRYSEAALLLDQYAKDCEEAILALITGAVWEEALRLIYM
HNRQDITETNLKPALLEAVNSQMGFLEAQVATFARHRNRLAVVREQKEKARLDMLDEDGP
DCPDAELYSEASSMMTASKYSQSNSRISSRSSKNRRKAERKKLSLKEGSPMEDRALMHAL
GEILTTVDKMREEIHSLLKALVLFQFDKQAEKLQLAYEETLQAVEAAVPEVWPEGPQSHH
APVTGPNSTANSIMASFQQQQRPAASQQDAETPAAPKMRNGVKWKLSILKSARVVTLLLH
SRGSNSINPVNVCL
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctgaagctgctgaagagcttagggagctcggagctgcagggtctcggctcc
ccgcagcgtttctgtgttcgggctgactctggctctctgctggtcgcctcgcagttctcc
atcacagagtttgagcctcgcactggccaggttgtgtgcgaagcctcgctgacagcagac
gggttcctccccgaggacggcagcggggtggtggtcggactgcaggacctggctgagctg
cagtctgcttgtttggccacagcaggtggagacgttgttctcttcaacctcaacaccaac
cagttggaatgtgttggcagcgttgacagcggtcttacctcaatgagctggagtcctgat
gaagagcttgtggttctgacgaccggtcaggaaacaatcataatgatgaccaaagacttt
gaaccgatcacggaggtgggaattcaccaggacgattttggtgaagggaagttcatcaca
gtgggctgggggaaaaaggagactcagtttcatggctcagaggggaagcaggcagcacag
aggaagactcagcaggtgcagccagctgtggcctgggacgaccgcaggccgcgggtcacg
tggcgaggagacggccagctgttcgccatcagcgccatctgtcctcagaccggagccagg
aaagtccgggtctggaacagagagggggtcctgcagaccacgagcgagccaatcaacggc
ctggagcaggctctctgttggaaaccttcaggcaacctgatcacgagcactcagcgtcat
cccaacaaacacagtgtcgtgttcatggagaagaacggactgctgcacggagacttcact
ctgccactcagtagagaccaagctaaggtgaaggagctgctgtggaacaatgactccacg
gttttaaccgtttggttggaggacttgacggctggagaggacggacatgtcaacacttac
atccagctgtggacagtgggaaactaccactggtacctgaaacaaagtctggactttggt
cgagaccctcagaaagctccggtccatgtctgctgggacccagagcgccccctacggctc
cacgtggtgacctacaactggacctgcttcgcctacgactggggctggacgactgagcga
agccccggggtggacggttctgaccacgccggcgtggctgtgatcgacggagacaaagtc
ctggtgacaaccttcaggcagagtgtggttcctcctcccatgtgttcgtttgagctgcag
ttgaagtcgcctgtcaatcaggtgacttttctgcatcggccgaagggaaccaatcagatt
gcagcattcaccgtcgatggacaaatttcagtcttcagccaagattcaggacaggctgaa
gtaacaacagatggatttaagacagtgtcccgacctcttgtcctccagaaaaccttcagg
tttcctgtccctcaggacgagcctctggctctgcggcagctgctgtggctgcaggatgag
ctgtttttagccgtcagttctggtctgctgccgacttcctccactctgctgattcttcac
gcagatcaggatgctggagacactctggcagtcaggtctcgagtggaagtagacggtgtt
gtggtcagtgtggttcacagctcccagactggaactgtggctttccaactggaggacgga
cagataaggaagctgctctgggattgtcctgagccgtcagcagaggactggtgtgactcc
agcggctgcaggatcagcttccctgttccctgcgtccagacggcgctctgcagcatcagt
ggagcggaatacctgcttggcctcacggacagatcccacctgtatgctggagacacagag
cttgcttccaacgtttgttcctttgccgtttgtgacgacttcctcctgatcagcacacac
tctcacacctgccgctgcctgcagctgagcacgctcacagtcaaagggctgcaggcagct
ctggcctctgatggaggtcagaatgatgagacacttcggcgagtggagcgaggatccagg
atcgtcaccgtggtgcctcaggacaccagagtggttctgcagatgcctcggggaaatctg
gagaccgtccaccacagagcgctggtgttggctcagctcaggaagtggttggatgagctg
aggttcagagaggcctttgaatgtatgaggaagctgaggatcaacctgaacctcatttat
gatcacaacccaaaggttttcctggaaaacattgagaccttcatcacacaactcaactcc
atcaactccattaacctcttcctcactgagctcagagaggaggacacgagctgcagcatg
tacccccgtcccgacagcggcccggcccagacccaacccacccagaagaaggtcgatgtc
gtttgtgatgctttacggagcgccatggagtcaatggatccgaacaagttctgtctgtcc
gtcctgactgctcacgtgaagaagacggttccggagctggagatcgcgctgcagaaggtt
cacgagctccgagaggatcctcctgaagctcccggctctgtgagcgctgaagaggcgtta
aagtacctcctcttcctcgttaatgtcaacgatctgtacgagcactcccttggaacgtat
gacttcgacctcgtcctcatggtggctgaaaaatcccagaaggaccccaaagagtacctt
cctttcttaaacatgctgaagagcctggagccgaactaccaacgctacaccatcgacaaa
cacctgaaacgctacaggaaggccttggtccacctcaccaagtgcggagaggagcatttc
cctgaagtgctgtctctggtgaaggagcagaaactctacagcgaagctctgaggttgtac
gccgcagacagtcctcagttcaagtttctgagctgtggatacgccgaacacctgatggag
cagcaacaggcagagcaagccggcttgttgctatggcgatgtggcgagcctgtcagagcc
ctgcaggcgttcacgatcagctccagctggaggaacaccatctgtgtggctcagcagatc
ccgctgccgcccgaccagctggctctgctggccagagacctggcagagaagctgactgag
cagaggcggtactcagaagctgctctgctgttggatcagtacgccaaggactgcgaggag
gccatcttggctctgatcacgggtgcagtctgggaggaggcgctcagactgatttacatg
cacaacagacaggatataactgagaccaacctgaaaccggcgctgttagaagctgtaaac
tctcagatgggctttctggaggctcaggtggcgacgttcgctcggcacaggaaccgtttg
gctgtggtccgggagcagaaggaaaaggccaggctggacatgcttgatgaagacggtcca
gactgtcccgatgctgagctttactccgaggccagcagcatgatgaccgcttccaaatac
tcccagagtaactcccgcatctcctcgaggtcgtcaaagaaccgccggaaagcagagaga
aagaagctgagcctgaaggaaggaagcccgatggaggacagagccctgatgcacgcgctc
ggggaaatcctcaccactgtggacaaaatgagagaggagatccacagcctcctgaaggcc
ctggttctgttccagtttgacaaacaggccgagaagctgcagctggcctacgaggaaact
ctgcaggcggtggaggcagctgttcccgaggtgtggcccgaaggcccgcagagccaccac
gctccggtcaccgggccgaactcgactgcaaacagcatcatggcttcgttccagcagcag
cagagacctgcagcttcacagcaggacgctgagactccagcagcaccaaagatgagaaac
ggtgtcaagtggaagctcagtattctgaaatcagctcgtgttgtgactctgctgctccac
agcagaggatcaaacagcattaatccagtgaacgtttgcctctga
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