Kryptolebias marmoratus (mangrove rivulus): 108244039
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Entry
108244039 CDS
T05608
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108244039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108244039
Transporters [BR:
kmr02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
108244039
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
108244039
NCBI-ProteinID:
XP_017285378
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All DBs
Position
LG18:17747053..17763234
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AA seq
726 aa
AA seq
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MDDAVEDVGQMTSQQVLCDPAEQKTRKRPGRSTLKLFIGALSFAYFSKALTGTYVKSSIT
QIERRFDLSSSHVGLIDGSFEMGNLLFLALVSHFGAQLHRPKLIAAGCLLMAAGALLTGS
THFFMGRYKFDTVVPSDGSNVSACSDRLETADMSGVQVETTSEACVSESGSNMWIYIFLG
NALRGIGETPVTPLGVSYIDDFAKAENSPFYIACLQTITLLGPTFGFLLGSYCAKLYVDV
GQVDLDGVTITPRDARWVGAWWLGFLVSSGLLLVSSVPFWFLPRSLPKQEGDEDAPAPDG
TEDTLGSGSPDLKLTDIAKGFLPSLKRLLGTPAYFLLLCGSVLKFSSFIGLFTFKAKYME
QQFGQSASRANFLLGVLNLPAVAVGIFLGGLIMRRYKLSVVSGAQLSLATSFMGYLLLLL
LFGTKCENLPVAGLTVSYNGSKSVSYGGETLVSECNGGCSCLPEDWDPVCSGSGITYVSP
CLAGCLASSGHGRNTVFHNCSCVSTSFPAGSTTSVRLGQCPHAKDCSSSFTSYMAVSVLS
SFINALGATPGYMVIIRCISPELKSLALGIQALGTRTLGGIPAPVYFGALIDSTCLKWSL
KKCGGRGACRIYDSDMYRVIFLGLVTCLSGSSYFFLIAVILLLRRQFRRAELETELRRTK
ASKEMELQASGAGSRGPGLLPGTKVCLRSVTGSEEGLSSTNIMRESKRLAETTAEVTPQT
PHGVNT
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgccgtggaggacgtcggtcagatgaccagccagcaggtcctgtgtgaccct
gccgagcagaagaccaggaagcgtcccggccgctccaccctgaaactgtttataggagca
ctctccttcgcctacttctccaaggccctgacggggacctacgtgaagagctccatcact
cagatcgagagacgcttcgacctctccagctcgcacgtcgggctcatcgacggcagcttc
gagatgggtaacttgttgttcctcgccctcgtcagccattttggggctcagctccatcgg
cccaaactcatcgcagctgggtgtttgctcatggctgccggggcgctcctcaccggctcc
acccacttcttcatggggcggtataagttcgacaccgtcgttccgagcgacggctcgaat
gtttcggcgtgttcggaccgcctggaaacagccgacatgtccggcgttcaggtggaaacg
accagcgaagcctgcgtgtctgagtccggttccaacatgtggatctacatcttcctgggg
aacgctctgcggggcatcggggagacgcccgtcactcctctgggcgtctcgtacatcgac
gacttcgccaaagcagagaactcgccattctacatcgcttgtctccagaccatcaccctc
ctgggccccaccttcgggttcctcctcggctcctattgtgccaaactctacgtcgacgtt
ggacaagtggatctggacggcgtgaccatcactcccagagacgcccgctgggtgggggcc
tggtggctggggttcctggtgtcctccggcctcctgctcgtttccagcgtccccttctgg
ttcctgcctcgctcgctgcccaaacaggagggggacgaagacgcgccggctccggacggg
acggaggacacgctcggcagtggcagccccgacctcaagctgaccgacatcgctaaaggg
ttcctgccgtcgttgaagcgcctgctaggaacccccgcctacttcctgcttctctgcgga
agcgtcctgaagttcagctccttcatcggcctcttcaccttcaaggccaaatacatggag
cagcagttcggacagtcggcgtccagagccaacttcctcctgggtgtgctgaacctgcca
gcggtagccgtggggatctttttgggcgggctcatcatgaggcggtacaagctgagcgtg
gtctccggcgcccagctgtctttagccacctccttcatgggctacctgctgctgctgctg
ctgttcggcaccaagtgcgagaacctccccgtggccgggctcaccgtgtcgtacaacggg
tcgaagagcgtgtcgtacggcggcgaaacgctcgtctcggagtgtaacggaggctgctcg
tgcttgccggaggactgggaccccgtttgctcgggcagcggcatcacctacgtgtccccg
tgtctggctggctgcctggcgtccagcggccacggcaggaacacggtttttcacaactgc
agctgtgtgtccacgtccttccccgcgggcagcaccacgtcggtgaggctgggacagtgt
cctcacgccaaagactgcagcagcagtttcacctcctacatggccgtttctgtcctcagc
tccttcatcaacgctctgggcgccacgcctggctacatggtcatcatacgatgcatttca
ccagagctgaagtctctggcgctcggtattcaggcgttgggaaccaggactctcggtgga
attcccgccccggtgtatttcggcgctctgatcgactcgacttgcctgaagtggtcgttg
aagaagtgcggcggcaggggggcgtgtcgtatttacgactctgacatgtacagagtcatc
ttcttgggtctggtcacttgtctcagcggctcctcgtatttcttcctcatcgccgtcatc
ctcctcctcaggcggcagttcaggagggcggagctggagacggagctgaggcgaactaaa
gcgtcaaaagagatggaactccaggcgagcggcgctggttcgaggggtcccgggctactt
cctggaacaaaggtttgtttaaggagcgtgacgggctcggaggaggggctcagttccaca
aacatcatgcgggaatcgaaacgcctggcagaaaccacggcggaggtgactcctcagact
ccccacggggtgaacacgtaa
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