Kryptolebias marmoratus (mangrove rivulus): 108244121
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Entry
108244121 CDS
T05608
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04136
Autophagy - other
kmr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108244121 (atg13)
04136 Autophagy - other
108244121 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108244121 (atg13)
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108244121 (atg13)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108244121 (atg13)
Atg1 complex
108244121 (atg13)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108244121 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
108244121
NCBI-ProteinID:
XP_017285509
UniProt:
A0A3Q3AJG2
LinkDB
All DBs
Position
LG23:complement(11022237..11028154)
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AA seq
534 aa
AA seq
DB search
MDSDLSPQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVHLSGLGEGFQTVRVGVVGTPI
GTVTLSCAYRINLAFMSNRQFERTAPIMGIIVDHFVDPPCSNQRPANMGHPCNYRAPEEE
EGAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTQLCW
PLTLYASRLSYQPAAEFCHPAANTNQVLQGGKEGGVVLVPSQPPHGAEVHLTVENNTPSS
SGDEEGLLQSGEGGRRSVSPSDPVESLSAFTRKVGAFVNKPSTQITASSLDLPFAAFAPR
GLDSEENDPMVHPPDSPPCQSPLQASLHSQGSDGSVQQDDFVMVDFRPAFSKDDLMPMDL
GTFYREFQNPPQLASLSLNTSSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctgagtccacaggatagaaaagacttggacaagttcatcaagtttttc
gccttgaagactgtccaggtgattgtccaggctcgcctcggagagaagatctgcactcgc
tcgtcttcgtctcccactggctctgactggttcaatttggccatcaaagacatcccagag
gtcactcatgaggccaagaaggcgctggccggtcagcttccaggcatcggtagatccatg
tgcgtggagatctccctgaagacgtccgagggtgactcaatggagttggaaacttggtgc
ctggagatgaatgaaaagtgtgataaggacatcaaggtgtcatacacggtctataaccgt
ctgtctgtcctcctgaaatctctgctggctatcaccagagtaacacctgcctataaactg
tccagaaagcagggacacgactatgtcatattatacaggatttacttcggggaagtccat
ctgagtggattaggagaaggattccagacggtgcgcgtcggcgtcgtcgggactcccatc
ggaacggtcacgctctcgtgtgcttaccgcatcaacctggcgttcatgtccaacaggcag
tttgagaggacggctcctatcatggggatcatcgtggaccactttgtggatcctccctgc
agcaaccagcgtccggctaacatggggcatccatgcaactacagagccccggaggaagag
gaaggagcatttgcaggagttcaggactcgcaggaagtctgcaccacctccttctccacc
tctcctccctctcagtgtgtgtgtaccctgagtccctctccttctaaactgtccaagccc
ctcccgctggacagtctgcagctcccattggctcccggacttgtcactcaactatgctgg
ccgttgacgctgtacgcttccaggctgtcctaccagcctgccgccgagttctgtcaccct
gcggccaacacaaaccaggtgttgcaaggcgggaaagaaggcggggtcgttctggttccc
tcccagcctcctcatggagccgaggttcatctgacggtagagaacaacacacccagcagc
agcggcgacgaagaaggcctgctgcagagtggcgagggggggaggaggagcgtctcgccc
tctgacccggtggagtctctcagtgcgttcacgaggaaggtcggcgcgtttgttaacaaa
cccagcacacagataacagcgagcagtcttgacctgccgtttgctgcattcgctcctcgt
ggactcgactcggaggagaacgaccccatggtccaccctccggactcgcctccctgccag
tcccccctgcaggccagcctccactctcagggctcggacggctcggtgcagcaggacgac
tttgtcatggtggactttcgcccggccttttccaaagacgacctgatgccgatggacctg
ggcacattctaccgggagtttcagaaccccccgcagctggccagcctgtcgctgaacacc
agctcccagtcgatggccgacgacctggactcgctgccggagaaactgcgtgtgtacgag
aaaaacatagacgagtttgacgcgtttgtggatatgcttcagtag
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integrated database retrieval system
