Kryptolebias marmoratus (mangrove rivulus): 108244155
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Entry
108244155 CDS
T05608
Name
(RefSeq) double-stranded RNA-specific editase 1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108244155
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108244155
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
108244155
NCBI-ProteinID:
XP_037829767
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All DBs
Position
LG23:11758382..11851015
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AA seq
694 aa
AA seq
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MSSCSTDVKENRDLDNPCSKEKVGAKAVQLPNRSARCGRKRPLEEGNNGHTHSKYRPKKR
KKVSGPILPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMSVEVNGQHFSGSGPTKKKA
KLNAAEKALRSFVQFPNASEAHMAMGRTLSVHTDFTSDHADFPDMLFNAFEASVPLNEPF
YLASNSNSSFASLGINYSLLPSPISHLAQSPLPPTPSSFTSPTSGKNPVMILNEMRPGLK
YMFVSESGESHAKNFVMSVTVDAQNFQGCGRNKRLAKARAAQAALSALFNMQLDQAPSRQ
PIPKEGLQLHLPQVLADAVSHLVIDKFSELTDKFTSPHARRKVLSGVVMTTGTDVKEAKV
ICVSTGTKCINGEYMSDQGLALNDCHAEIVARRSLIRFLYSQLEHFLSNNEDEHQKSIFT
KCDNKNGYKLKENVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIES
GEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGFQGSLMSYFTEPIYFSSII
LGSLYHADHLSRAMYQRITEIEVLPQSFSLNRPLLSGISNTEARQPGKAPNFSVNWTVGD
LGLEVINATTGKDDLGRPSRLCKHALYSCWMRLHCKLSSTLRIQMVQPSIYHEAKQAAVE
YHSAKQTLFKAFHKAGLGAWVKKPIEQDQFSLNT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgcagcacagatgttaaggaaaatcgagacttggacaacccctgttccaaa
gagaaggttggagctaaagctgtacagcttcccaacaggagtgcaaggtgtgggaggaaa
cgtcccctagaggagggcaataatggccacacgcattccaagtacagacctaagaaacgt
aagaaagtttctggacccattctgcccaagaatgcactcatgcaactgaatgagatcaaa
ccaggtctgcagtacaaacttctctcccagactggaccagttcatgcacctgtttttgtg
atgagtgtggaggtcaatgggcagcacttcagtggctcgggtcctaccaagaagaaagcc
aagctgaatgcagcagagaaggctctacgctcctttgttcagtttcccaacgcgtccgaa
gcccatatggccatgggccgtactctgtctgttcacacagacttcacctcagaccacgct
gactttccagacatgctctttaatgcctttgaggcatctgtccctttaaatgaaccattt
tacctggcctccaacagtaacagttcctttgcatctctgggaataaattattcattgcta
ccctcccccatctcccacctggctcagtctcctttacccccaacaccatctagtttcact
tccccaacaagtggcaaaaatcctgtgatgatcctcaacgaaatgcgaccaggccttaag
tatatgtttgtgtcagaaagtggggagagccatgccaaaaactttgtcatgtcagtgaca
gtagatgcccagaacttccagggttgtggtcggaacaagaggctggccaaggctcgggca
gcccaggcagctctatctgccctcttcaatatgcagcttgaccaggcaccatcccgtcag
cccatacccaaagaaggactgcagcttcacctaccacaggtcttggcagatgctgtttct
catttggtgattgacaagtttagcgaactgacagataaattcacgtctccacacgctcgg
cggaaagtcttgtcaggagtcgtcatgacaacaggtactgatgtgaaagaggctaaggtc
atttgtgtatccacagggacgaagtgcatcaatggtgaatatatgagcgatcaaggtttg
gctctcaatgactgccatgctgagattgtggctcgccgctctctcatcaggttcctgtac
tcccagctcgagcacttcctcagtaacaatgaagatgagcatcagaaatccatctttacc
aagtgtgacaacaaaaatggctacaaactgaaggaaaatgtccagtttcacttatacatc
agcacctccccctgtggagatgcccgcatcttttcacctcatgaagctggagtggaagat
caaggggacagacacccaaacagaaaggcccggggacagctgcgtactaaaatcgagtcc
ggtgaaggaaccatacctgtgcgctctagtaacactattcagacatgggacggggttctt
cagggtgagaggctgctcaccatgtcatgtagtgacaagattgcaaggtggaatgtggtt
ggattccaaggctctctgatgagctacttcactgaacccatttacttctccagcatcatc
ctgggtagcctgtaccatgccgatcacctctccagagctatgtaccagaggatcacagag
atcgaggttctacctcagtcctttagccttaaccgaccactgctcagtggaataagtaac
acagaggcccgtcagccaggaaaggcaccgaattttagtgtaaactggacggttggagac
cttggtttagaagtcattaatgccactacggggaaagatgatctaggtcgaccttctagg
ctctgcaagcatgcactttacagctgctggatgcgcctgcactgcaagttgtcctccacc
ttgcgaatccaaatggtgcagcccagcatctaccacgaggccaagcaggcagcagtggag
taccattctgccaagcagaccctcttcaaagcctttcacaaagccgggcttggtgcctgg
gtgaaaaagcctatagaacaggaccagttttcactcaacacctga
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