Kryptolebias marmoratus (mangrove rivulus): 108244167
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Entry
108244167 CDS
T05608
Name
(RefSeq) semaphorin-5B
KO
K06841
semaphorin 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
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Gene cluster
GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_spondin
PSI
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
108244167
NCBI-ProteinID:
XP_017285602
UniProt:
A0A3Q3AIL9
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Position
LG23:complement(10983722..11014012)
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AA seq
1098 aa
AA seq
DB search
MRLNVVVTMMTSGWAALSPCGLVLVISWSLCLSQQPNVKPADCSRKEHPVVSYQALRSWV
SEFSHPGVKDFSQLAVDLSKNQLIVGARNFLFRLSLNNASLIQATKWAPDEDTKRSCQSK
GKSEDECQNYIRVLLINGRTLFTCGTNAFTPVCITRQISNLSQALDTVNGVARCPYDPRH
NSTAMVTQKGELYAATVIDFSGRDPVIYRSLGNVPPLRSAQYNSKWLNEPHFVSAYEIGR
FAYFFLRETAVENDCGKMVFSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRSGEIPFY
YNELQSTFHLPEQELIYGVFTTNVNSLSASAVCAFNLSSITLAFNGPFRYQENPRTAWLS
APNPIPNFQCGTLDEDGPGENLTERSLQDAQRLFLMSDVVQPVSVNPLLTQDNLRFSKLV
VDIVQGQNALYHIMYISTEYGTILKALATTNKSLHGCYLEELRILPEGKTGTIKSLKILH
NDRSLFVGLDDRLVKIPLERCSRYPAERECMEARDPYCGWDHKQKRCTTIEGSSNMNQWT
QNITECPVRNLTQDGGFGPWAPWQPCNHDDGEGFFSSCVCRSRSCNGPVARCGGVECKGP
TIQVANCSRNGGWTPWSSWGQCSSSCGIGFEVRQRSCNNPSPRHGGRICVGQGREERLCN
EKKPCPLPMSWTAWSPWAHCSAECGGGVQSRARTCENRNSCPGCTTEFKVCNLESCPEVR
RNTPWTPWMPVNMSQDGSRQEQRFRYTCRAPLHDPQQLQLGKKKLETRFCPNDGSGACQS
DSLVENLIKTSGRTFSQPQGARWGSWETWSGCSQKCSRGFRTRKRSCSTPEGRTGPAACA
GSPVEYQDCNVHLCPVDGGWSCWSAWSQCSSSCGGGHYQRTRTCSSPQPANGGDICIGLH
TEEALCNTHPCEAWADWTDWGDCDEEGLQHRTRRCGDDQEAATNLCQGNLTQSRPCQPHE
VPVILPEQDNQSCGTFTLFQLVAVGSASFFAAALLSGLAFSYCHHLNRPSAESAVIHPST
PNHLTYNKQGNATPKNEKYIPMEFKTLNKNNLHVNDETCNHFSSQLASSNMFTTTYYPPC
VSKYDFHADSPCRSYMHS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaatgtggttgtaactatgatgacgtcggggtgggcggccctctccccttgt
ggactcgtgctggtcatcagctggtccttgtgtctgtctcagcagccgaacgtcaaacct
gcggactgcagccgcaaggagcatccagtcgtctcctaccaagcgctgaggtcatgggtg
tctgagttttctcatccaggagtgaaggatttctcccagctagccgtagacctgagcaaa
aatcagctcattgtgggagcaaggaactttctcttccgactgagtttaaacaatgcctcg
ctcatacaggcaactaaatgggcacccgatgaagacacaaaacgctcatgtcagagcaaa
ggcaaatctgaggatgaatgtcaaaactatatccgtgttttgctgattaacgggagaacg
ctcttcacgtgtgggaccaacgcttttacacccgtctgcataaccaggcagatttctaac
ctcagtcaagcgttggacacggtgaacggcgtggcccgatgtccctacgacccgcgtcac
aactccaccgccatggtgacgcagaagggcgagctatatgctgccacggtgattgatttc
tccgggcgcgacccggtcatctacaggagtctggggaacgtgccgcctctacgatctgct
cagtacaactccaagtggctcaacgagcctcatttcgtgtctgcgtatgagatcggccgg
tttgcctacttcttcctgagagaaaccgccgtcgaaaacgactgcgggaagatggtgttc
tcccgggtggcgcgtgtttgcaagaacgacgtgggcggccgttttcttttggaggacacc
tggaccaccttcatgaaggcccgcctcaactgctcacgctccggggaaatcccgttttac
tacaacgagctgcagagcacgttccacttaccagagcaggaactcatttacggcgtcttc
accactaacgtgaacagtttatcagcttctgctgtttgtgccttcaatctgagctccatc
accttggccttcaatggaccctttcgctaccaggagaacccccgcactgcttggctctcc
gccccaaaccctatacccaactttcagtgtggcaccctggatgaagatggccccggggag
aatctgacagagcgcagccttcaggacgcgcagcggctcttcctaatgagcgacgtcgtc
cagccggtctccgtcaaccctctgctcacccaggacaacctgcgcttctccaagctggtg
gtggatatcgtgcagggccaaaacgctctctaccacatcatgtacatcagcaccgagtat
ggcactatcctgaaggctctcgccacaaccaacaagagccttcatggctgctacctggag
gagctgaggatcctccccgaggggaaaacgggaacaataaaaagtctgaaaatcctccac
aacgacaggtcactgtttgtggggctcgatgacagactggtgaagattccattagaacgc
tgctccagatacccagccgaacgagagtgcatggaggctcgggacccttactgcggctgg
gatcacaaacagaagcgctgtaccaccattgaaggcagctccaacatgaaccagtggacc
cagaacatcactgagtgcccggtgaggaacctgacgcaggacggcgggtttggtccgtgg
gcaccgtggcaaccttgcaaccacgatgacggcgaggggtttttcagcagctgcgtgtgc
cggtctcgctcctgcaacggaccggtggccagatgtggaggagttgaatgcaaagggccg
acgatccaagtggcaaactgttccagaaatggtggctggactccctggtcgtcctggggt
cagtgcagcagcagctgcggcatcgggttcgaggtgaggcagcggtcgtgcaacaacccc
tcccctcgccacggaggtcgaatctgcgtcggccagggccgggaggagaggttgtgcaac
gagaagaagccctgtcccttgcccatgtcgtggacagcgtggagcccctgggctcactgc
agcgccgaatgtggaggaggggtccagtccagggccagaacctgtgagaacaggaacagc
tgcccgggctgtacgacggagtttaaggtctgtaacctggagagttgccccgaggtgcgc
cgcaacaccccctggacgccctggatgccagtcaatatgagtcaagacggctcccggcag
gagcagaggttcaggtacacttgtcgggcaccgctgcacgacccccagcagctgcagctg
gggaagaagaaactggagacccgtttctgtccaaacgatggatccggagcttgtcaaagt
gactctttggttgaaaatctgattaagaccagcggcagaactttttcccagcctcaagga
gcccggtggggatcctgggaaacgtggtccggctgttcccagaagtgttcccgaggcttt
cgaaccaggaaacggagctgctctacgccagagggcaggaccggccccgcggcctgtgcg
ggatccccggtggagtaccaggactgtaacgttcatctctgcccagtggacggaggctgg
tcgtgctggtctgcctggtcccagtgctcgtccagctgtggaggcgggcactaccagcgg
acccggacgtgcagcagcccgcagcctgcgaacggaggagacatctgtatcggcctgcat
acagaggaggccctctgtaatacacatccatgtgaagcttgggctgattggacggactgg
ggagactgcgatgaggaaggtctgcagcatcgcactcgtcgctgcggggacgaccaggaa
gccgcaaccaacctctgtcagggcaacctgactcagtccagaccctgccagcctcacgag
gtgccagttattttacccgagcaggacaaccagagctgtggaaccttcactttgttccag
ctggtggctgtgggctcagccagcttctttgctgcggctctcctctccgggctggctttc
tcttactgccaccacctgaaccgcccgtcggcggaatcagcggtcatccaccccagcacc
cccaaccacctcacctacaacaagcagggcaacgccacaccaaagaacgagaaatacatc
cccatggagtttaagacgctcaacaagaacaacctccacgtgaatgacgagacgtgcaac
cacttctcctcccagctggcctccagcaacatgttcaccaccacctactatcctccctgc
gtgagcaagtacgacttccatgccgactccccatgcaggtcctacatgcacagctga
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