Kryptolebias marmoratus (mangrove rivulus): 108244194
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Entry
108244194 CDS
T05608
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108244194
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108244194
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
108244194
NCBI-ProteinID:
XP_017285646
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Position
LG6:23122452..23153746
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AA seq
903 aa
AA seq
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MGLKDHLEDGTGHILTLGLDLDYLHVDGADRQAGPSIAKASGVLRVRGGAQSRSGKSIGG
STISLSTTSGYSSSSSCSNFSEESAISDNEDERLHIRSDLGCKSSNQDQSHLHQHESSLD
CQPVRLDLAPNLFPGDSPQSKASLLSDPISGCRTKVEFALKLGYSEELVLLVLRKLGPEA
LINDMLGELVKLGTKTEMEPQRSPTVSQSPSSSLCCSSSSSSNSSLDSFRLMCPSPLPED
KDNFRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLDRGHRDITVFVPAWRKEQSRPDA
LITDQEILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAN
EKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEPRKQPCPYGKK
CTYGHKCKFYHPERGSQPQRSVADELRASAKLSSAASRGLLEHALLVKSRNTGQSEEMPE
NEPGQGKKLPNQSPRRSLPDLMENKLQIHSKAEGRRGSSGNIIAGHPASPSSGHLDRWEH
LRESNESGSRLAEASGSSQTDPYHRCKSPEVGYSSLVNPYSGLSLVVPQTPECLLPADLQ
TGSLPSDCSSGGSAGSDSFSPDAMLDDSPKCHHKHPHHHHHYANQYVHVTSQVSSGRGHP
PPHGYNVTQRMQRPHATGIKELTSPVTSHTSPHETTLSYIPTQLRRSLLNSFPGELTSRP
AQTSTPHSHSQSSPFSCNLMPLQEGELQDSRVYNGSPFNSNRNYFGLNQQPQHQISLDSN
YQPSTKPCYDLFSYKSFPPLHGKGWHSPWGQQVHASPCGLSPPLPQQPLRSITSHKNHML
SEPQYSENRALDRYQELRERIFVNLCGIFPLDLVRKVMTKNPHVMDAQELAAAILMEKLQ
HVS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatggaacaggccacatcctcaccctggggctggat
ctggactatctccatgtggatggtgcagacaggcaggctggcccaagcattgccaaagct
tctggagtcttacgagtccgaggcggtgcccagagtaggagcggtaagagtattggtggg
agtaccattagcctaagcacaacttcaggttatagcagcagtagcagctgcagtaacttt
tcagaagagagtgccatttctgataatgaagatgaacgacttcacattagatcagatctt
ggatgtaaaagctcaaaccaggatcagtctcatttacaccagcatgagtcctccttagac
tgccaaccggtcaggctggacctggcaccaaacctgttccctggagattcaccacagtcc
aaagcatccctcttgtcagatcctatctctggctgccgcaccaaggttgagtttgctctt
aagctaggctactctgaggagctagtgctgctggtccttaggaaactgggcccggaagca
cttatcaatgatatgctgggagagctggtcaaactgggaaccaaaacagagatggagcca
caaagaagtccaactgtgtcccagtctccttcatcctctttgtgctgttcttcctcctcc
tcttctaactcttccctggactcctttcggctgatgtgtccatcccctctgccagaagac
aaagacaactttcggcctgtggttgtggatggaagcaacgtagccatgagtcatgggaac
aaggaagtgttctcctgccaaggcatccagctggctgttgactggttcttggaccgaggg
catcgggatatcactgtttttgttccagcctggagaaaggagcagtctcgacctgatgct
ctaatcacagatcaagagatcctgcggcggctggagaaagataagatcctggttttcact
ccgtctcggcgcgtgcagggtcgccgtgtggtttgctatgatgatagatttatcgtcaaa
ctggcctatgaatcagacggaataattgtttccaatgacaactaccgggacctagccaat
gagaagccagagtggaagaaatttattgatgaacgcttgctgatgtactccttcgtaaat
gacaaattcatgcctccagatgacccactcgggcgccatggaccaagtctggagaatttc
ctgagaaaaagacctgttgtccctgaacctaggaaacaaccctgtccttatggaaaaaaa
tgtacatacggccacaagtgtaagttttatcatccagaaaggggcagccagccccagcgt
tctgtggctgatgaactccgtgccagtgccaaactttcatcagccgcttccagaggcctg
ctggaacatgctctgttggtgaagagccgaaatactggtcagtctgaagaaatgcctgaa
aatgaaccaggacagggcaaaaaattaccaaaccagagtcctaggagatccctccctgat
cttatggagaacaaactccaaattcattccaaagcagagggtcgtaggggaagcagtggc
aacatcattgcagggcaccctgcttccccttcatcaggacatctggacagatgggaacat
ctcagagaaagcaatgaaagtggctctagacttgctgaagcctctggatcaagccagact
gacccttaccacagatgtaagtccccagaggtgggatatagctctctggtaaacccttat
tcaggtctcagccttgtggtaccacagaccccagaatgcctcctaccagctgacctgcaa
acagggtctctgccctctgactgtagcagtggtggcagtgcaggctcagactctttctcc
cctgatgccatgttagacgatagtcccaagtgccaccataaacaccctcaccaccatcat
cactatgctaatcagtatgtccacgtcacaagtcaggtttcctctggacggggccatcct
cctcctcatggatataacgttactcagagaatgcaaagaccacatgcgactggtattaaa
gaactaacctctccggttacctctcacacatctccacatgagaccaccttgtcctacatc
ccaacccagcttcggcgttctttgttgaacagttttcccggggaactgacctctcgtcca
gcccaaacgtctactccccactctcattctcagagctcccccttcagttgcaatttgatg
cctttgcaagaaggtgaacttcaggactccagagtgtacaatgggtcaccattcaattct
aatagaaactactttgggctaaaccagcaacctcagcatcagattagcttggactctaat
tatcagccttccactaagccttgctatgatctgttttcctataagagctttcctccactt
catgggaagggttggcactctccttggggtcagcaagttcatgcatccccctgtggtctt
tcaccaccactcccacagcagccccttcgatccatcacttcccataagaaccacatgctc
tctgagccacagtactcggagaatcgcgctttggatcggtaccaggagttaagagagagg
atctttgttaacttgtgtggcatcttccctctggatttggtgcggaaggtcatgaccaag
aaccctcatgtgatggatgcccaggaacttgcagctgcaattttaatggagaaactgcag
catgtctcataa
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