Kryptolebias marmoratus (mangrove rivulus): 108244210
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Entry
108244210 CDS
T05608
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108244210 (ift88)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
108244210 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_14
TPR_7
TPR_19
TPR_16
TPR_11
TPR_9
ANAPC3
TPR_17
SNAP
TPR_CcmH_CycH
ARM_TT21_5th
TPR-S
TPR_10
DUF2225
ARM_TT21_4th
NatA_aux_su
DUF5588
ARM_TT21_2nd
HAT_PRP39_C
HEAT_Nup120
DUF6584
TPR_15
Consortin_N
SPO22
Motif
Other DBs
NCBI-GeneID:
108244210
NCBI-ProteinID:
XP_017285678
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All DBs
Position
LG6:23577806..23598496
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AA seq
870 aa
AA seq
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MENVHLAVEEDDLYSGYNDFNPTFDSEDLENDMGFQQAIRTSHGRRPPMTAKFPGTAIGT
RPLVSSFGSRIPLASSMGRPVTGAVQDGAARPMTAVRAAGYTSYMTRGSSFDPLGQSRGP
APPLEAKNEDTPEEKIKLLEKKVNDLTEESCVAQSTGNLQLALEKAKEAGRKERTLVRQR
EQSGNSDHINLDLTYSGETLEQVTSLASEAVDFTSQLCRQRSLRTVLLNLANQYENNEMY
PEALNSYQVIVKNKMFSNAGRLKVNMGNIYFKQKNYPKAIKFYRMALDQISNSHKDMRIK
IMQNIGVVFVRLGQYSDAITSFEHIMSESPNIKTGFNLILCYYAIGDRERMKKAFQKLIS
VPLGIDDEDKYILSNDDTSLNMVIEAIKNDKLHQMERDLKLRTEKYIMTAAKLIAPAIET
SFASGFDWCVDMVKTSQYVELANDLEINKAITYLRQKNFNQVEAVETLKTFEKKDSRVKS
AAATNLSCLYFLEKDYDQADRYADLAMNADRYNPAALINKGNTVFLKQDYEKSAEFYKEA
LRNDSSCTVGLYNLGLTYKRLGRLEEALDCFLKLHAILRNSDQVMYQLAILNELLGDSQQ
AIEWLMQVISVTPTDPHALAKLGKLYDDEGDKSQAFQYYSESYRYFPCNIDVIEWLGAYY
IETQFCEKAIQYFERAMLIQPTQVKWQLIVASCYRRSGNYQKALETYKEIHRKFPENVEC
LRFLVRLSTDMGLKEVQEYATRLKKVEKMKEIREQRVKSGRENSARGRREGREGSAGSAA
ASSVLTSPKKSIVMDSGHSSGSIRGERLSAKMRSLPGSNEPYEASSPKELDASYVDPLGP
QMERPKTGAKKRVDDDDFAEEELGDDLLPE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtgcatctggctgtagaggaggatgatctttactcgggttacaacgacttt
aatccgacatttgactcagaggatttggagaatgatatgggcttccagcaagcaatcaga
acaagtcatggaagaagacctccgatgactgcaaagtttccaggcactgccattggaact
cggcctttagtttcatcatttggatctcgtatacctttggcctcgtcaatgggcagacca
gtgactggagctgtgcaggatggggcagctcgaccgatgactgctgtcagagcagctggt
tacacttcctacatgacacgtgggtcaagctttgaccctctgggtcagtccaggggacct
gcacctccgcttgaagcaaagaatgaggacacgcctgaagagaagatcaagctcctggag
aaaaaagtgaatgacctgacagaagagagctgtgtggcgcagagcacaggcaacttacag
ctggctcttgaaaaagccaaagaggcaggcaggaaggagcgaacactggtcagacagagg
gaacagtctggcaattcagaccacatcaacctggacctcacctactctggagagacacta
gaacaggttacaagtttggcttcagaggctgtggactttacctctcagctatgcaggcag
agatctctgagaacagtgttgctcaaccttgccaaccaatatgagaacaatgaaatgtac
ccagaggccctgaacagctaccaggtcattgttaagaacaagatgttcagtaatgcaggc
cgcctgaaagtcaacatgggcaacatctacttcaaacagaaaaactaccccaaagcaatc
aagttctaccgcatggctctggatcagatctccaactctcacaaggacatgaggatcaag
atcatgcagaacatcggtgtggtctttgttcgcttgggccagtattcagacgccataacg
tccttcgagcacatcatgagtgagagtcccaacataaagacaggcttcaaccttatcctg
tgctactatgccattggagacagagagaggatgaagaaggccttccagaagctcatctct
gttcctctaggtattgatgatgaagacaagtacatcctgtctaatgatgacaccagcttg
aatatggtgattgaggccattaagaacgacaagcttcaccaaatggaaagagatctgaaa
ctccggactgagaagtacatcatgactgctgccaagctcattgccccggccatcgagaca
tcatttgctagtggatttgactggtgtgttgacatggtgaagacttctcagtatgttgag
cttgccaatgatctggagatcaacaaagccatcacatacctccgacagaaaaacttcaac
caggttgaggccgtggaaacactgaagacatttgagaagaaggacagcagagtaaaaagc
gctgctgccactaatctctcttgtctctatttcctggagaaggactatgaccaggctgac
cgatatgctgacctcgccatgaatgctgatcgttacaaccccgcagcccttatcaacaag
ggcaacaccgtgtttctcaaacaggactatgaaaagtctgcagagttttacaaagaagct
cttagaaatgattcctcgtgcactgtcgggctctataacctgggtctgacgtataagaga
ctgggccgtctggaagaagctctggattgttttctaaagcttcatgccatcctgaggaac
agtgatcaagtcatgtaccagctggccattcttaacgagctgctgggagattctcaacag
gcaatcgagtggctgatgcaagtcatcagtgtgactcccacagacccccatgcactggcc
aaactgggaaagctgtatgatgatgaaggggacaagtctcaggctttccagtactacagt
gagtcctataggtactttccctgcaacattgatgtgatcgagtggctcggggcttactac
atcgagacacagttctgtgagaaagccatccagtactttgaaagagccatgctcatacaa
ccaacacaagtgaaatggcagctaatagtggccagctgttacaggagaagtggaaactac
cagaaagctctggagacttataaagagatccatcgcaagtttccagaaaatgtggaatgt
ttgcgattcttggtgagactgtccacagatatgggtctaaaagaggtccaagaatatgcc
accaggctgaagaaggtagagaagatgaaggagatcagagagcagagggtgaagtcggga
cgggagaacagcgcgagaggtcgtcgagaaggcagagagggcagcgcagggagcgctgct
gcttcatctgtcctcacctctcctaagaagtccatcgttatggacagcggccacagcagt
ggcagcattagaggagagcgtctgagcgccaagatgaggtcacttcctggttctaacgag
ccctacgaagccagcagcccaaaagaactcgatgcctcctacgtggacccactggggcct
cagatggaaagaccaaagacgggtgcaaagaaacgggtggatgatgatgactttgcagag
gaagagctgggagacgacctgctgccagagtag
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