Kryptolebias marmoratus (mangrove rivulus): 108244223
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Entry
108244223 CDS
T05608
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04110
Cell cycle
kmr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108244223 (smc1b)
04114 Oocyte meiosis
108244223 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108244223 (smc1b)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108244223 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
108244223 (smc1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
Hum_adeno_E3A
Motif
Other DBs
NCBI-GeneID:
108244223
NCBI-ProteinID:
XP_017285706
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All DBs
Position
LG11:4359142..4376929
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AA seq
1249 aa
AA seq
DB search
MGYLKQLDVENFKSWRGKQVIGPFMQFNCIIGTNGSGKSNVMDALSFAMGERAAALRVRH
LRDLVHGAHIGQPVSHTARVAIRYCDERDGETVFSRTITGDSSAYHINGAHVTHAAYIEE
LSKIGIVTKAQNCLVFQGAVESIALKDPKERTKMLECISQSKELAAEYQKKKEDLLKAKE
ETQFHFNKKKSATVEKKQVSQEKIEAQKYQALLDDLHQEHLQLSLSELYFNERDVSAISG
TLRERQLSAAAKNTELVNWEKTVKAHKKEHGRLTREQQHIDKEIRGQEHTLSQTQSQYIK
AKVNTSHHVKKAEEMHETVKKSRKLLAIKEQEVAEGRQEAAELERTWKSYEKQVQEEGAA
RGRDIELDMDQLKRYKELKELAQKQGAVLSQQAEKLHWELRADSEKMSFDLRRKKEAEVA
IRNSQNHLEELANRAEKLEEYTKTCKSSLEDYRQQEESLTAELQRVSQRTKEVNQELGEV
MEELRNARLDSHESKRQQRRRELFEKLRRLFPETVFGRLSDLCSPIHKKYQLAVTKVFGN
NMNAIVVASEKVARECICFIKEERAEPEMFLPIDYLVVNPLNERLREIVGAKMVIDVVQV
NASSGAAQLRKVVQYVCGNALVCETIKDARSVAYERKERVKTVSLDGTLFKTSGVISGGS
SYLRSKARCWDEKDMMHLKERKDQLTTEMRDLMKLKRKESDLKRIIAQSQGAQTRLKYSK
TDLENLQKKIIPRCQAEISRMESELANLDYQIQMQQESLETKNAEMKTIKHQIDQIEDLV
FSDFCAEIGVDNIREYEQEHLKEQAELDKKRLEFESQRARLNAQIDFEENQLEQDRKKLR
KMEDTISMEEKTMAELKKEEQKLLEAVEEGQNQLLELKNQLLNKKKQVASAKAELDQKSK
ELKEINKELVKLQREVMSAETALEQKRMARHNLLLACKIQDLPIILLSGSLDEISEVQLA
TDSESTSATLDIYEREAQLVIDFSELEEELRSLQAEEEIEAYMEKLKASISSLEVVLHRT
TAPNLKALEKMREVKDKLQGVTEAFDASTKAARKCNEEFEQVKARRCHLFSQCFEHVSVV
IDQIYKRICRNSSAQAILSAENPDEPYLGGINYNCVAPGKRFMSMENLSGGEKAIAALAL
LFAIHSFRPAPFFILDEVDAALDNTNIGKVTSFIREESRQNMQIIVISLKEEFFSKADAL
LGVYSDLDECMFSRILTLDLRPYPLVEEDNGRQSEKETREDRGQDFCSP
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggttatctgaagcaacttgatgtcgaaaacttcaagtcatggcgagggaaacaggtt
attggtcctttcatgcagttcaactgcattattggcacgaatggctctgggaagtccaat
gtgatggacgccctgagcttcgccatgggggagcgggccgccgccctccgggtccggcac
ctcagagacctggtccacggagcccacatcggtcagccggtgtcccacacggcccgggtg
gccatccgctactgcgacgagcgggacggagagaccgtgttcagtcggaccatcaccggg
gattcttctgcctatcatattaacggtgcccatgttacacatgctgcttacatcgaagag
ctctcaaagattggcattgtgaccaaagctcagaactgtctggtgttccagggggcagta
gagtccatagctttgaaggacccgaaggaacgaaccaagatgttggagtgcatcagtcag
tccaaggagttggctgctgaataccaaaagaagaaagaagacctactgaaagctaaagag
gaaacacagtttcacttcaacaagaaaaaatctgccactgtggaaaagaaacaagtgtct
caagaaaagatagaggctcagaaataccaggcgctgttagacgaccttcatcaggagcat
ttgcagctgagcctttctgagctttactttaacgaaagggatgtcagcgctatcagtggc
acgctgagggagaggcagctttctgccgcagctaagaacactgaactggtgaactgggag
aagaccgtcaaagctcacaagaaggagcacggacgcctcaccagggagcagcagcacatt
gacaaagagatccgtggtcaggagcacactttgtcccagacccagtctcagtacatcaaa
gccaaagtgaacacctctcaccacgttaagaaggctgaagagatgcacgagactgtgaag
aagagtcggaagctgttggccattaaagagcaggaggtggcagagggtcggcaggaagct
gctgagctcgaaagaacttggaagagctatgaaaagcaggtccaggaagaaggagccgca
agaggaagagacatcgagctggacatggatcagttgaagagatacaaggagttgaaggag
ttggcccagaagcagggggctgtgctcagccagcaggcagagaagctgcactgggagctt
agagctgactctgagaaaatgtcttttgacctgcgcagaaaaaaggaggcggaggttgcc
atcaggaacagccaaaatcatctggaagaattagcaaatagagcagagaaactagaagag
tacaccaaaacatgcaagtcatcccttgaggattaccgtcagcaggaggagagccttaca
gcagagctccagcgggtttcccagcgtaccaaagaggtgaaccaagagctgggtgaggtg
atggaggagctgaggaacgcacgcctggacagccacgagagcaagaggcagcagcggcgc
agagagctgttcgagaagctccgcaggctctttccagaaactgtgtttggccgactctct
gacctgtgcagcccaatccataagaagtaccagctggctgtcaccaaggtgtttggcaac
aacatgaacgcaatcgtggtggcatctgagaaagtagcccgtgaatgcatctgcttcatc
aaggaggaacgagccgaaccagagatgttcttgcccattgactacttagttgtgaatcct
ctgaatgaacggctgagggagattgtaggtgccaagatggtgatagatgttgtccaggtc
aacgcttcctcaggcgccgcccagctgagaaaagtggtgcagtacgtttgcggtaacgct
ttggtgtgtgaaactattaaagacgccaggagtgtggcctacgagcggaaggagcgcgtt
aagacagtatccctggacgggacgctgtttaaaacatcaggggtgatctctggaggttcc
agttatctgcggagcaaagctcgctgctgggacgagaaggacatgatgcacctgaaggaa
cgcaaggaccagctgaccactgagatgcgagatttgatgaaactgaagagaaaggagtca
gacttgaaacggatcattgcacaatctcaaggagctcagacgcgcctgaaatactccaaa
acagatttggaaaacctccagaagaaaatcatccctagatgccaagcggagatctcacgg
atggagagcgaattagcaaaccttgactatcagattcagatgcagcaggagagtcttgag
acaaagaatgcagagatgaagacgattaaacaccagattgatcagattgaggacttggtg
ttttcagacttctgtgctgagatcggtgtggacaacatcagagagtatgagcaggagcac
ttaaaagagcaggcagagctcgacaagaaacggctggagtttgaaagtcagcgtgcccgg
ctgaatgcacaaattgactttgaagaaaaccaacttgagcaggacaggaagaagcttcgc
aaaatggaggataccattagtatggaggagaaaaccatggctgagctcaaaaaggaagag
cagaaactgttggaagcggtggaagaaggtcagaatcagctgctggagctgaagaaccag
ctgctcaacaaaaaaaaacaggtggcttcagccaaggctgagctggaccagaagtctaaa
gaacttaaggagattaacaaagagttggtgaaacttcagcgggaggtgatgtcagcagag
actgccttggagcagaaacgcatggcgagacacaacctgctactggcctgcaagattcaa
gacctgccgatcattctgctgtcaggcagcctggatgaaattagtgaggtgcagctggcc
acagattcagaaagcacttcagccactctggacatctacgagagagaggcgcagctggtc
atcgacttctccgagttggaggaagagctccggagtctgcaggctgaggaggagatagag
gcttacatggagaagctgaaagcatcgatctcctccctggaggtagtgctacatcgcacc
actgcacctaatctgaaagctctggagaaaatgagggaggtgaaggacaaattacaggga
gtgactgaagcttttgacgccagcactaaagcagccagaaaatgtaacgaggagtttgag
caagtcaaagcccgacgttgccacctcttcagtcaatgtttcgagcatgtgtcggttgta
attgaccaaatctataaaagaatatgcagaaacagcagcgcccaggccattctgagtgct
gagaatccagacgagccatatttaggtggcatcaactacaactgtgtggctccagggaaa
cgcttcatgtccatggagaacctgtctgggggagaaaaggccatcgctgctcttgccttg
ctgtttgccatccacagcttccgcccggctcctttcttcatcttggatgaggtggatgca
gctctggacaacactaacatcggcaaggtgaccagcttcatcagagaggagtccaggcag
aacatgcagattatcgtcatctccctgaaggaggagtttttctccaaagccgacgccctg
ctgggagtctactctgacttagacgagtgcatgttcagtcgcattctgacgctggacctg
cgtccttacccgctggttgaagaggacaacgggagacaaagtgagaaggagaccagagaa
gacagaggacaggatttctgtagcccgtag
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