Kryptolebias marmoratus (mangrove rivulus): 108244316
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Entry
108244316 CDS
T05608
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108244316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108244316
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108244316
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108244316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
PRY
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
108244316
NCBI-ProteinID:
XP_017285908
UniProt:
A0A3Q3BK69
LinkDB
All DBs
Position
LG23:complement(2855230..2893506)
Genome browser
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPLPAPHSGPNSPSEEGSNRL
ALVPVSAAMSSPCTPPEPVQCQFCEQDPPQEAVKTCVTCEVSYCDECLKATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVSDDQLICSLCKLVGRHREHQVAALSDRYEK
LKQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASHQEGKLMEECDVLIDIIQQRKQ
IIGSKIKEGKAQRLRKLAQQISNCKQCIERSSALIAQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDT
ISVHWTSDDEFSIVSYELQYAIFTGQSNIVSLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QDRFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGVAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRIGILLDYDAGYLSFYDAVGSQHLHTFNVSFVQPVC
PVFNVWNKCLTILTGLPIPDHLEGLEPNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgtccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgcccacagcctgtgctttggttgtgcccaccgcatcctcgtttcc
cactgcgccacaaacgagtccgtccagagcatcggcgccttccagtgccctacttgtaga
tatgtcatttccctgagtccagagcgtggactagagggacttaagagaaacgtgaccttg
caaaacatcatcgacagagttcagcgagcctcgtcttcggctgggcttcctctgccgctg
cctttgccggccccccacagcgggcccaactctccctctgaggaagggagcaaccggctg
gctctggtccccgtcagcgccgccatgtccagcccgtgcaccccaccggaaccggtccag
tgccagttctgcgagcaggacccacctcaggaggcagttaagacgtgcgtgacgtgcgag
gtgtcgtactgcgacgagtgcctcaaagcaactcacccaaacaagaagccattcaccggt
caccggctcatcgagccgatgcccgactcccacctcagagggctccagtgcctggagcac
gaggaggagaaggtgaacatgtactgtgtgagcgacgatcagctgatctgctcactgtgc
aaactggttggaaggcacagggagcatcaggtggcagcactgagcgaccgctatgaaaaa
ctcaagcaagccctcgattccaacctgagtaacttaatcaagaggaacaatgagctggaa
tctctgatgggcaaactgatccagacttgtcaacatgtagaggtgaacgcgtcgcaccag
gaggggaagctcatggaggagtgtgacgtcctgattgacatcattcagcaaaggaagcag
atcattggcagcaagattaaagaggggaaggctcaaaggcttcggaagctggcccaacag
atttccaactgcaagcagtgcatcgagaggtcctccgccctcatcgcacaggctgatcag
acgctgaaagaaaccgatcacgctcgcttcctgcagacggccaagagcatcaacgagagg
gtttccatggcaactgcatcaacgcaggtgctgatccctgagatacacctcactgacacc
ttcgacacgtttgccctggactttaccagggaaaagaagctgctggagaatctggattac
ctcacagctccaagcgctccatgcattagggaagagttgtgcacggcttcctacgacacc
atcagcgtccactggacgtctgatgatgagttctcaattgtgtcctatgagcttcagtac
gccatcttcaccggacagtccaacatcgtcagtctatgtaattcattggaaagttggatg
attgttcctaacatcaagcagaaccactacacggtgcacggtttgcaaagtggcaccaag
tacatcttcgttgtaaaggccattaatcaagcaggaagccggagcagtgaaccagggact
ctgaagaccaacagtcagccatttaaactggaccccaaatctgctcacaagaagctgaag
gtgtcacatgataatctgacggtggagcgggatgaaaccacttccaagaaaggccacagc
caggatcggttctccagccagagcagctacggcgtggtgggaaacgtctatattgacagt
gggcgtcactactgggaggctttgataggaggaagcacatggtacgctgtaggtgttgcc
tacaaatcagcccccaagcatgagtggatcggcaagaactcggcctcctgggtgctctgc
cgctgcaacaactcctgggtggttcgccataacagcaaggagctggccatcgagccatcg
ccccacctacgtcgcattgggatcctgctcgattacgatgccggatacctgtccttctac
gacgccgtgggctcacagcacctccacacgtttaatgtttcttttgttcagcctgtgtgt
cccgtgttcaatgtgtggaataagtgtctgacgattctcaccggtctacccatcccagac
catctagagggactggaaccaaacaactaa
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