Kryptolebias marmoratus (mangrove rivulus): 108244359
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Entry
108244359 CDS
T05608
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108244359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108244359
03036 Chromosome and associated proteins [BR:
kmr03036
]
108244359
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108244359
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
108244359
Chromatin remodeling factors
BAF complex
108244359
PBAF complex
108244359
GBAF(ncBAF) complex
108244359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
108244359
NCBI-ProteinID:
XP_024864941
LinkDB
All DBs
Position
LG3:5534205..5559055
Genome browser
AA seq
1667 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPPPTGHSQPGP
SGYGPDNMHPLHKPMEAMHEKSLGEDSRFSQMKGMSMRPGGHSGMGPPPSPLDQHSQGYH
SPLGGSDHSSPVASNGPPSGPLMPSASSSSSSAGPGSSSASLDGPSGDQHSLGPNNRPGP
PGSSGPGPSSGPSLGSGVSSLGSGLENSGPAGPGGPTPFNQNQLHQLRAQIMAYKMLARG
QPLPDHLQMAVQGKRPMPGMQQQQPMTSLVPGAGGGPVSGPTGPGSGPGPMGSGYSRAHG
MMGPNMPPPGPSGTPVGMQGPNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPA
PPSVPPAASPVMPPQTQSPSQPAQPPPMMPYYAKQNRITPIQKPCGLDPVEILQEREYRL
QARIAHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETAL
DAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVT
GKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLL
QQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLENAEGQTPALGPDGEPLDETSQMS
DLPVKVIHVDSGNILTGVDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEP
QPSSTPVEEKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAV
TEKVDKQSTLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME
HKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLT
TYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKL
PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR
RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNT
IMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHK
VLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPESEYFIFLLSTRA
GGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA
KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVMNEEDEVPDDETVN
QMIARSEEEFEQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEE
EKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEVEEEVRHKKTTRKRRRDRDLDLPG
PSCSSGSRGRGDRDDDGKRQRKRGRPPAEKLSPNPPSLTKKMKKIVDAVIKYKDSASGRQ
LSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQNAQTFN
LEGSLIYEDSIVLQSVFTSLKQKIEKEEESDGEESEEEEEEQEDGSESESRSVKVKIRLG
RKDKGGDRGKGRSRRSGRTRAKPVVSDDDSEDEQEEERSPSGTDEES
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacctgatcctcccatggggggcacccctcgcccaggtccctcccccggtccg
ggcccctcccctggtgccatgctgggccccagcccggggccctcaccgggctcctcgcac
agcatgatgggccccagccccggccctcctcctcccacgggacactcccagccggggccc
tcggggtacggcccggataacatgcaccccctgcacaaacccatggaggccatgcacgag
aagagcctgggtgaggacagccgtttcagtcagatgaaggggatgtctatgagaccgggc
gggcacagcggtatgggccccccacccagtcctctggaccaacactcacagggctaccac
tctccattaggtggctctgatcactccagtcctgttgcttcaaatgggcccccatctggt
cccttaatgccatcagcttcatcctcctcctcttctgccggtcctggatcttcctcagcc
tccttagatggccccagtggagaccaacactccttggggcctaataaccgtcccggacca
ccaggtagttctggaccaggcccgagctctggcccaagtcttggctccggtgtctctagt
cttggctctggtcttgaaaacagcggccccgctggtcctggtggcccaacccccttcaac
cagaaccagcttcatcaactccgagcccagatcatggcgtataagatgctggctcggggc
cagcctctgccggatcatctccaaatggctgttcaaggaaagaggccgatgccggggatg
caacagcagcagcccatgaccagcctggtccctggagctggtggaggaccagtaagtggt
ccaacaggaccaggatcagggcccgggccgatgggctcaggctacagccgagctcatgga
atgatgggtcccaacatgcctcccccgggtccatcagggaccccagttggaatgcaagga
ccaaaccctaatggaccacccaagtcctggcctgaaggtcccatggtgaacgcagcagcc
ccctccaatgcacctcaaaaactgatcccccctcaacccacgggcaggccttcccccgcc
ccgccatcagttcccccggctgcttcgcccgtcatgcccccgcagacgcagtcgcccagt
cagccggcgcagcctcctcccatgatgccttactacgccaagcagaaccgcattactccc
attcagaagccctgcggcctggacccagtggagatcctgcaggagagagagtacaggttg
caggctcgaattgcccatcgcattgctgaattggagaaccttccaggttctttagctggt
gatttgcgcaccaaagctactatagaactcaaagctctccgcctgcttaacttccagaga
cagctgcgtcaagaggtggtggtgtgcatgcgacgcgacacagccctagagacggcactt
gatgccaaggcctacaaacggagcaagcgtcaatctctgcgggaggcgcgcatcacagaa
aaactggagaagcagcagaagattgaacaggagcgcaaacggagacaaaaacatcaggag
tacctcaacagcatcctccagcatgccaaagacttcaaggagtatcaccgttcagtcacg
ggcaaaattcagaaactgaccaaagctgtggccacctaccacgccaacacagagcgagag
cagaagaaggagaacgagcgaattgagaaagaacgaatgaggaggcttatggctgaggat
gaagagggttaccggaaactgatcgaccagaagaaggataagcgcctggcttacctgctg
cagcaaaccgacgagtacgtggccaacctgacggagctggtccgagcccacaaagctgca
caggccctcaaggagaagaaaaagaagaagaagaaaaagaagaagttggagaacgccgag
ggacagactcctgctttgggccctgatggagagcctctggatgagacgagccaaatgagt
gacctgcctgtgaaggtcatccatgtggacagtgggaatatcctgaccggtgtggatgct
cccaaagctggacagctggagacctggctggagatgaaccctggttacgaggtagctcca
cgctcagacagtgaagacagcgaagaggaggaagaggaggaggaggaagaagaggagcct
cagccttcatccaccccagtggaggaaaagaagaagattaccgaccccgacagtgaagat
gtgtcagaggtggatgtccgacatatcatcgagaacgctaaacaggacgtggatgacgag
tatagtggtgcagcgtttgctcgaggacttcagtcgtattattctgtggctcacgctgtc
acagagaaggtggacaaacagtccactttactgataaacgggcagcttaaacagtaccag
attaaaggtctagagtggctggtttctctttacaataacaacctaaatgggatcctggct
gatgagatggggctgggaaaaaccatccagactattgctctcattacgtacctcatggag
cacaaacggctcaacggaccctacctcatcatagtacccctgtcaactttgtccaactgg
gtgtatgagttcgacaagtgggcaccgtcagttgtgaaagtgtcctacaaggggtctcct
gctgccagaagagcctttgtcccccaacttcgcagcgggaagtttaatgttttactcacc
acttatgagtacatcatcaaggacaagcaagtgctggccaagatccgttggaagtatatg
attgtggacgaaggccaccgtatgaagaaccaccactgtaaactgacccaggtcctgaac
acccactaccttgctccaaggcgagtcttgctgaccgggactccgctgcagaacaaacta
cctgagctgtgggcccttctcaacttccttttgcccaccattttcaagagctgcagcact
ttcgaacagtggtttaatgctccctttgccatgactggagagaaggttgaccttaatgaa
gaggagacaatcttgattattcgccgcctacacaaagtgctacgccccttcctgttacga
agattaaagaaggaggtggaggcacagcttccagagaaggtggaatatgtcatcaagtgt
gacatgtcggctcttcagagggtcctgtacagacacatgcaggccaagggggtcctgctc
acggatggatcagagaaagacaagaagggcaaaggaggcacgaagacactgatgaacacc
atcatgcagctgaggaagatctgtaaccatccttatatgtttcagcaaattgaggagtcc
ttctctgaacatttaggattctccggcgggatagtccagggtcctgacctgtatcgagca
tcgggaaagtttgaagtgttggatcgaatccttccaaagctgagagccacaaaccacaaa
gtgctgctcttctgtcagatgacctcgctcatgaccatcatggaggactactttgcctac
cgcaacttcaagtatctgcgtctggatggcactacaaaggctgaagacagagggatgcta
ctgaagaccttcaatgacccagagtcggagtactttatctttctcctgagcacaagagca
ggaggtctcggcctcaacctgcagtctgccgacactgtgattatttttgactcggactgg
aacccacatcaggacctgcaggctcaggaccgtgctcaccgcatcggtcagcagaacgag
gtgcgagtgctgcgtctctgcacagtgaacagtgtagaggaaaaaatcctggctgcggcc
aaatataaattgaacgtggaccagaaggtcatccaggctggcatgtttgaccagaagtct
tccagccacgagcgcagggccttcctacaggccatcctggagcacgaggagcaagacgag
gtctggggacaggaagtcatgaatgaagaagatgaggtgccggatgacgagacggtcaac
caaatgattgccaggagtgaagaagagtttgagcagttcatgcgcatggacctggaccgg
cgtcgcgaagaggcccgtaacccgcggagaaaaccccgtctgatggaggaggatgagctt
cccacgtggatcatgaaggacgacgctgaagttgagcggctgacctgcgaggaggaggag
gagaaaatgtttggtcgaggttctcggcagcgaaaggaggtggactacagcgactcgctg
acagagaagcagtggctcaaggcgattgaggaaggcacgctcgaggaggtggaggaagaa
gtgcgccacaaaaagaccacccgtaagagaaggagggaccgtgatctggatctccctggt
ccctcctgttcctctgggagccgaggacgaggggacagagatgatgatgggaagcggcag
aggaagaggggacgaccacctgccgagaagctgtcccccaatcccccctccctcacaaag
aagatgaagaaaattgtggatgctgtcataaaatacaaagatagcgccagcgggcgtcag
ctgagcgaggtgttcatccagctgccgtctcgaaaagagctgcccgaatattatgagcta
atccgcaagccagtggacttcaggaagatcaaggagaggattcgaagtcatcgctaccgc
agtctgggtgacctggagcgagacgtcatgctgctcttccaaaacgctcagaccttcaac
ctggagggttccctgatatatgaagactccatcgttctccagtcagtgttcaccagcctg
aagcagaagattgagaaggaggaggaaagtgatggagaggagagcgaggaagaagaggag
gagcaggaggatgggtcagagtctgaatcacgctctgtgaaagtgaaaatccgtctgggc
aggaaggataaaggtggcgatcgggggaaaggtcgcagcaggcggtcgggacggaccaga
gccaaacctgtcgtcagtgatgatgactctgaggacgagcaggaagaggagcgctcaccc
agtggcactgatgaggagtcctaa
DBGET
integrated database retrieval system
