Kryptolebias marmoratus (mangrove rivulus): 108244377
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Entry
108244377 CDS
T05608
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108244377 (cxxc1b)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108244377 (cxxc1b)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108244377 (cxxc1b)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108244377 (cxxc1b)
COMPASS/SET1 complex (yeast)
108244377 (cxxc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
DUF7813
Motif
Other DBs
NCBI-GeneID:
108244377
NCBI-ProteinID:
XP_017286014
UniProt:
A0A3Q3BPK0
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Position
LG4:23178964..23184260
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AA seq
570 aa
AA seq
DB search
MESEMSDIDPAPGPETSSMEGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCISITEKM
AKAIQEWYCMNCREENPTLEVKYRSKKNRDKETESDKGELQYSTPSTPDYRSERRRGSKV
KRSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCVVRARKMLRVKEEE
ILLRERRNNSHHRRRRYSEDYDSEVDLYQQYKAAGLNINMLWESDDDDEPAFSPVMRKKA
IKVKHVKRREKKFDKKKESRRHKQKQKHKDRNRHSERGDFRDSGGQRQCLGPNCVNAARL
NSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKHLERIRREQQSARLRLTE
MERRFHELEGIIAKAKQQAVQQDEEVNEGDSEDTDLQVFCVSCGHPINPKVALRHMERCY
AKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGC
PLVKNVFELTGDYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAM
TNRAGLLALMLHQTIQHDPLTTDLRGNKDR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaaatgtccgacatcgaccccgcaccgggacccgagaccagcagcatggag
ggggagaatgctccactttactgcatctgtcgtaaacctgatatcaactgtttcatgatt
ggctgtgacaactgcaacgagtggttccacgggcactgcatcagcatcactgagaagatg
gccaaagccatccaggagtggtactgcatgaactgcagagaagaaaacccaactttggaa
gtaaaatatcgatcaaagaaaaaccgtgataaggaaaccgaatcggacaaaggagagctg
cagtacagcaccccaagcaccccggactacaggagtgaaaggcggcgcgggtctaaagtt
aagcgttcggtccgcatgtgtggcgaatgtgagccctgcaggaggactgaggactgcgcc
cagtgtgacttctgcaaggacatgaaaaagtttggaggacctaacaaaatccgacagaag
tgccggttcaggcagtgtgtggttcgagccaggaaaatgctgcgagtgaaggaagaggag
attcttctgcgtgaaaggaggaacaactcccaccacagacggaggcgatactcggaggac
tacgacagcgaggtggacctctaccagcagtacaaggcggcagggctcaacatcaacatg
ctgtgggagagcgatgacgacgacgagccggctttcagccccgtcatgcgtaagaaagct
ataaaggtcaagcacgtcaagagacgggaaaagaagtttgacaaaaaaaaagagtctcgc
cgccataagcagaaacagaagcacaaagacagaaacagacacagtgagaggggggatttt
cgggacagtgggggacagcgtcagtgtctcgggccgaactgtgtgaacgcagcaaggctc
aactccaagtactgctctgaggactgcggcatgaaattggcagccaaccgcatctacgag
atcctcccgcagcgcatccagcagtggcagcagagcccgtgcatcgctgaggagcacggt
aagaagcacctggagcgcatccgccgggagcagcagagcgcccggctccgcctcaccgag
atggagcgacgcttccacgagctggagggcatcatcgccaaggccaagcagcaggcggtt
cagcaggacgaggaggtgaacgaaggagacagcgaggacaccgatctgcaggttttctgc
gtgtcctgtggtcatcctatcaatcccaaggtggctctgagacacatggagagatgctac
gccaagtatgagagtcaaacatcctttggttccatgtatccaacaagaatagagggtgca
acaagactcttctgcgacgtgtacaacccccaaagcaaaacatattgcaagaggcttcag
gttctgtgtccggaacattccagagatccgaaggtcccagtggacgaggtgtgcggctgt
cccctagtgaagaacgtctttgagctgacgggagactattgccgggtttccaagcggaag
tgcaacaaacattacaactgggagaagcttcggagagccgaggtggacttggagcgggtc
agagtgtggtacaagctggacgagctttttgagcaagaacgtaacgtcaggactgctatg
accaacagagccggtctgctcgctctgatgttgcaccaaaccattcagcacgaccctttg
acgactgatctccgtggcaacaaggataggtag
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