Kryptolebias marmoratus (mangrove rivulus): 108244471
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Entry
108244471 CDS
T05608
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108244471 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kmr01007
]
108244471 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108244471 (vars2)
Enzymes [BR:
kmr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108244471 (vars2)
Amino acid related enzymes [BR:
kmr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108244471 (vars2)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108244471 (vars2)
Prokaryotic type
108244471 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
HrpB7
Laminin_II
Motif
Other DBs
NCBI-GeneID:
108244471
NCBI-ProteinID:
XP_017286196
UniProt:
A0A3Q2ZDX3
LinkDB
All DBs
Position
LG5:20061322..20089309
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AA seq
1088 aa
AA seq
DB search
MWRAGYSPSLRMPGKMAARLCSNKPPGAQSPVSSQLSSSPRPQAEKQRRRREREMAILSK
QHTSAGEETVNWSEKPKIVYTAQTPPGTKKDTSLPFPSSYSPEYVESCWYQWWEKEGFFS
PEQHERLSHGVDQTFSLCIPPPNVTGTLHVGHALTVAVQDALARWKRMQGYRVLWVPGCD
HAGIATQTVVERRLLRDQGKHRQDFTREEFLQEVWKWKNEKGEEIYHQLRKLGASLDWSR
ACFTMDPGFSRAVTAAFVRLCDSDLIYRSEGLVNWSCALQSAISDIEVDSVEVSGQTMLS
VPGYENKVEFGALYTFAYPVEGHDGRVAVSTTRPETMLGDVAVAVHPDDPRYQSFHGKQC
RHPFTNRLIPVITSTTVDMELGTGAVKVTPAHDHKDFLLSRRHTLPHVSVILGDGTMAPS
CGRWLEGKKRFDARQLVLDALAEKKLFVGKQNHPMTLPVCSRSGDVIEPLLKKQWFVRCG
KMAEKAIQAVEDGQLELIPQHYSKTWKNWMSSISDWCISRQLWWGHQIPAYQVELPESTT
RPEEQWVWGHSLDEARQRAAVKYGVKPEDVTLKRDPDVLDTWFSSGLFPFAMFGWPEQTS
DLQRFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFRQVLFHSLVRDKYGRKMSKSLG
NVIDPLDVIHGVSLQRLQEKVKEGNFDRREQLVAMEAQRKDFPKGIPQCGTDALRFALCS
HRIQGDDISLSVAQVLSCRHFCNKMWQTLRFTLGVLGENTQPLGTIEETTPLGSMERWIC
SRLYSTVAQCEQAFDAYELHAVTSALHSFWLHSLCDVYIEYVKPVLLREDEGAEVQADAD
DSDTTTVRQVARTVLYHCVSLSLALLSPFMPFITEELWQRLQPFRPRPPGAPTPTSLCLQ
PYPRSTHLAHWHFPEEEKDFLMVQEVIRVARSLRTQCGLRKEKPVMWAVCSPSQAQVLLH
FRSAVWTLSRISSLQLHCPDRPDWLPSVQSGPPPKESLVGLVDHTCQLHLYNQSGVNVDK
QILQLSQRRDRLVPKLEKILRRLQGSNDSANVPDHDRQQMEIKVSALKQELEVIEDQMKA
LQETQSTG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggcagggtattctccgagtctgaggatgccagggaagatggcagcccgactc
tgctccaacaagcctcctggagcgcagagccctgtctcctctcagctgtcctcctctcct
cggccacaagctgagaaacaaaggcgcagacgagagcgggagatggccatactgtccaaa
caacacactagtgctggagaggaaacagtgaattggagtgagaaaccgaagattgtctac
actgctcagacacctccagggacaaagaaagatactagtttgccgttcccatcttcgtac
agtcctgagtatgtggagtcctgctggtatcagtggtgggaaaaagaaggcttcttcagt
cccgaacaacatgagaggctgtctcatggtgtggatcagaccttttccctttgcatccct
ccaccaaacgtgacgggcacgctgcacgtgggccacgctctgacggtagctgtgcaggac
gccctggctcgatggaaaaggatgcagggctacagagttctctgggtccctgggtgtgac
catgctggtatcgcaacccagacagttgtggagaggagacttttaagagaccaagggaag
cacagacaagacttcaccagagaagaatttttgcaggaagtgtggaaatggaagaacgag
aaaggagaagagatctaccatcaactgaggaagctcggtgcttctctggactggagcaga
gcctgtttcactatggatccaggtttcagccgggctgtgaccgcagcttttgtcaggctc
tgtgattctgatctgatctatcgctccgagggtctggtcaactggagctgtgctcttcag
tcggccatttctgacatagaggtggactcggtggaggtctcagggcagaccatgttgtct
gttccaggatatgagaacaaggtggagttcggagctttgtacacctttgcgtaccccgtc
gaaggtcatgatggccgagtggcagtatccaccacccgccctgagacgatgcttggagat
gtcgctgtagccgtccacccagacgaccctcgatatcagagctttcacgggaagcagtgc
agacatcccttcaccaacaggctgatccccgtcatcacgagcacaacggtggacatggaa
ttaggaaccggtgcggtgaaggtgactcctgctcatgaccacaaagacttcctcctgtcc
aggagacacactctgccacacgtctcagtgattttaggagacggtacaatggcgccatct
tgtggacggtggctggagggcaagaagcgttttgatgccaggcagctcgtcctggatgct
ctggctgagaagaaactgttcgtgggaaagcagaaccatcccatgactttgcccgtctgc
agccgctcgggagacgtcattgaaccgcttctgaaaaagcagtggtttgttcgctgcggc
aaaatggctgaaaaagcgatacaggcggtggaggatgggcagctggaactcatcccgcag
cactactcaaagacctggaagaactggatgtccagcatcagtgattggtgcatctccagg
cagctttggtggggtcatcagatccctgcttaccaagtagagcttcctgagtctacaacc
agaccagaggagcagtgggtatgggggcacagcctggacgaagcccggcagagagctgct
gtgaaatacggagtgaagccagaagacgttactctgaaacgggacccagatgtcctggat
acgtggttctcctcagggctgtttccttttgcaatgtttggctggccagaacagacgtct
gacctgcagcgcttctaccccaactctattctagagaccggcagtgacctcatctttttc
tgggttgctcggatggtaatgttgggaacggagctgaccgggcagctacccttcagacag
gtcctgttccactctctggtgcgagacaaatacggtcggaagatgagtaagtctctgggg
aacgtcatcgacccgttagacgtgatccatggagtttctctccagagactccaggagaag
gtgaaggagggaaactttgaccgaagggagcaactggttgcaatggaagcccagagaaag
gacttccccaaaggaattcctcagtgtgggacagatgctttgagatttgccctttgctcc
cacaggatacagggtgacgacattagtttgtcggtcgctcaggtcctgagctgcagacac
ttctgcaacaaaatgtggcagaccctgaggttcacgctgggagttctcggtgaaaacaca
caaccactggggacaattgaagagacgacccctttgggcagcatggagcggtggatctgc
tctcgcctttacagcacggtcgcacagtgcgagcaggcttttgacgcttacgagctgcac
gctgtcacatccgccctgcactccttctggctccacagcctgtgcgatgtctacatagaa
tacgtaaagcctgtgctactgagggaggacgagggggcagaggtccaggccgacgcggat
gacagcgacaccacgaccgtgaggcaggtggccaggaccgtcctctatcactgtgtgtct
ctgtctctggccctgctgtcccccttcatgcccttcatcactgaggagctgtggcagcga
ctccagcctttcagacccagacctcctggagctccgactccgaccagcctgtgcttacag
ccctatccccggtccactcatctggcacactggcatttccctgaggaggaaaaggacttc
ctgatggttcaggaggtgatccgagtggctcgctcactgcggacccagtgtggcctgaga
aaagaaaagcctgtcatgtgggccgtgtgttcgcccagtcaggcccaggtcctccttcac
ttcaggtcagcggtttggactttaagccgaatctccagcctccagctccactgtcctgat
agaccagactggctcccatctgttcagtccggtcctccacctaaagagagtcttgttggt
ctggtggaccacacatgtcagctacacctttacaaccaaagcggcgtgaacgttgataaa
caaatcctgcagctttctcagcggagagacaggcttgttccaaagctggaaaagatcctc
cgcagacttcagggttctaatgattcggccaacgttcccgatcatgacaggcagcagatg
gaaatcaaggtttcagctctgaagcaggagctggaagtcatcgaggatcagatgaaggcc
ctgcaagagacgcagtcaacaggctaa
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integrated database retrieval system
