Kryptolebias marmoratus (mangrove rivulus): 108244478
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Entry
108244478 CDS
T05608
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108244478 (lrrc8da)
Ion channels [BR:
kmr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
108244478 (lrrc8da)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_9
LRR_R13L1-DRL21
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
108244478
NCBI-ProteinID:
XP_017286207
UniProt:
A0A3Q2ZHQ2
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Position
LG20:22229578..22238798
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AA seq
848 aa
AA seq
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MMFTLTEVASLNDIQPTYRILKPWWDVFMDYLGLVMLMLAIFAMTMQITKDHVACLPCMD
DSNEAADTKPPLGPEQNAQKAASSATTGATLATSIPSVTKDLPDEAVQELSTTQQTSLAA
EKYANQPQPRGVKTNLDFQQYVFINQICYHVGLPWYSKYFPYLILIHTIVLMVSSNFWFK
YPKTSSKIEHFVSILGRCFESPWTTKALSETACEDSEENKQRFTSTSSTPKQVSLEGKVK
GTDADPSTPMLGVRFSADKPIAEVPSSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIY
KLYVAQTSVKTVKFILILCYTSAFLLEINFQHFCKPNITQLIGYEIFFCTHNMAFMLKKL
LITYVALIVIYGMTCLYSLFWVFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQ
YDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVTRNAQDQQELHLFMLSGLPNA
VFDLTDLEVLKLELIPEVKFSAKVSQMTSLQELHLCHCPAKVVQTGFTFLRDHLRCLHVK
FTDVAEIPPWVYLLRSLRELNLIGGLNSENNKMIGLESMRDLRHLKTLCLKSNLTKIPTN
ITDLSPHLIRLVVHNDGTKLLVLNSLKKMTSLIELELHSCELERIPHAIFSLINLQELDL
KSNNIRTIEEIISFQHLKRLTCLKLWHNKIITIPSSIGQVKSLESLHLSHNKLESLSPAL
FLLPKLRHLDVSHNSITVLPPDVGLVHNLQHLAINSNKLEALPKPLFRCTKLKVLCLGNN
ALTTLPDAVGQLVQLTHLELRGNCLDRLPAHLGNCRLLRRSGLTVEDHLFDALPVEVKES
ISRETSGL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttactctcactgaggttgcatccttgaatgacatccagccgacgtaccgcatc
ctgaagccatggtgggacgtcttcatggactacctgggcttggtcatgctcatgctggcc
atatttgcgatgaccatgcagatcaccaaggaccacgtagcttgccttccatgtatggac
gactcgaatgaggcggcagatactaaacctccccttgggcctgagcagaatgcacagaag
gcagcctcatcagctaccaccggagccacacttgcaacctctatcccatcagtgactaag
gacttgccggatgaagctgttcaggagctcagcactacacagcagacttccctggcagca
gagaaatatgccaaccaaccccaaccgagaggggttaaaaccaacctggactttcaacaa
tatgtctttatcaaccaaatatgttaccatgttggcttgccttggtattccaagtacttt
ccatacctcatactcatccacaccattgttctcatggtcagtagcaatttctggtttaaa
taccccaaaacaagctcaaagatagagcactttgtttctattctgggtaggtgctttgag
tctccttggacgacaaaagctttgtctgagacagcttgtgaagactcagaggagaacaaa
cagaggtttacgagcacctcttcaaccccaaagcaggtgtctttagaggggaaggttaaa
ggcacggacgctgacccatccacacctatgcttggagtcagattttctgcagacaagccc
attgcagaagtaccgagcagtatgacaatacttgataaaaaggacggggagcaggccaaa
gctctgtttgagaaggtgaggaagttccgagcccacgtggaggacagtgatttcatttac
aagctctatgtagcgcaaacgtctgtcaaaactgtcaagtttattttaatattgtgctat
acttcagcctttttgcttgaaataaattttcagcacttctgtaaacccaatataacccaa
ctaatagggtatgaaatcttcttctgtacgcacaacatggcttttatgctaaagaagctg
ctcatcacctatgtggctttgattgtgatctatgggatgacatgtttgtactctctgttc
tgggtgtttcgaagacccctgaaagagtattcttttgagaaggtcagagaagagagcagc
ttcagtgacattcctgatgttaaaaacgactttgcgttccttttacacatggttgatcag
tacgatcaactgtactccaagcgctttggcgtcttcttgtctgaagtcagtgagaataag
ctgagagaaatcagcctcaaccacgagtggaccttcgaaaaattaaggcaactcgtcacc
cgcaatgctcaagaccagcaggagctgcatctcttcatgctgtctggtctcccaaatgca
gtgtttgacctcacagacttggaagtgctgaaactggagctgattcctgaggtgaagttt
tcagcgaaggtttcccaaatgaccagcttgcaagaacttcatctgtgtcactgtccagca
aaggtggtgcagacaggttttactttcctccgcgatcatctccgctgccttcacgtcaag
ttcacagatgtagccgagatcccgccttgggtctatttgctgcgcagcctgagggagctt
aacttaatcggaggcttgaactctgaaaacaacaaaatgatcggtctggaatccatgcga
gacttgagacatttaaagacattatgcctgaaaagcaacctgacaaagatacccacaaac
atcacagatctttcgccacatctgattcggttagtggtgcacaatgatgggacaaaactg
ctggtactcaacagtctgaagaaaatgacgagcctaattgaactggagctccacagctgt
gaactagaaaggatccctcatgctattttcagcttgatcaacttacaggagctcgacttg
aagtcaaacaacatcagaacaatagaggagatcatcagcttccagcacctcaagcggctg
acgtgccttaaactgtggcacaacaaaatcatcacgatcccttcatccatcggccaggtc
aagtctctggagtctctccacttgtctcacaacaagctggagtctctgtccccagccttg
ttccttcttcccaaactgcgccacctggatgtgagccataactccatcacagtgcttcca
ccagacgtgggtctcgttcacaacctccagcacttagccatcaactccaacaagctggaa
gcactgccaaagcctctcttcaggtgcaccaagctgaaggtgctctgcctggggaacaat
gcgctcaccacactgccggacgctgtgggtcaactggtccaactcacccacctggagctc
agaggaaactgtctggacagactacctgcccatttaggaaactgccggctgctgcgcaga
agtggccttactgtggaggaccatctttttgacgcactgcctgtggaggttaaggagagc
atcagccgagaaacaagtggcttatag
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