Kryptolebias marmoratus (mangrove rivulus): 108244485
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Entry
108244485 CDS
T05608
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108244485 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108244485 (gtf2b)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108244485 (gtf2b)
Prokaryotic type
Archaeal type
TFB
108244485 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
KIF9
Motif
Other DBs
NCBI-GeneID:
108244485
NCBI-ProteinID:
XP_017286219
LinkDB
All DBs
Position
LG20:complement(22211641..22225035)
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AA seq
318 aa
AA seq
DB search
MASTSRGEALALPKVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISRGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgcggagaagcattggccctgcctaaggttcagtgtcccaaccac
cctgatgccattctggtggaggactacagagcaggggacatgatttgtcctgaatgtggc
cttgtcgtaggcgaccgtgtaatcgatgtgggctcagagtggaggacgttttctaacgag
aaagctcttaaagatccctccagagtgggagacgctcagaacccactgctcaatggagga
gacctgaccaccatgatcagcaggggaacgggggctgccagttttgatgaatttggtaac
tccaagtatcagaaccggcggaccatgagcagctctgaccgggccatgctgaacgccttc
aaagagatcagcaccatggccgatcgcatcaacctgccgaggaacattgtagacagaaca
aacaacttgttcaagcaggtttatgaacagaagagtctgaagggacgagccaatgatgcc
atcgcttcagcctgtctctacatcgcctgcagacaggaaggtgtacccagaacctttaaa
gagatctgtgccgtctccaggatctccaagaaagagattggtcggtgcttcaagctgatc
ctgaaggcgctggagaccagcgtggacctcatcacgacgggggacttcatgtcccgcttc
tgctccaacctcggcttacccaaacaggtgcaaatggctgccactttcatcgcgaggaag
gccgtggagctggacctggtgcccggcaggagccccatctccgtggctgcagcagccatc
tacatggcctcgcaggcctctgcagagaagaagacccagaaagagatcggagatatcgcg
ggtgttgcagacgtcaccatcaggcagtcgtaccgactcatctatccacgagccgcagaa
cttttccctccagatttcaaattcgacacccccgtcgacaaactgccccaactgtga
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