Kryptolebias marmoratus (mangrove rivulus): 108244487
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Entry
108244487 CDS
T05608
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03030
DNA replication
kmr03410
Base excision repair
kmr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108244487 (zgc:110269)
03410 Base excision repair
108244487 (zgc:110269)
03450 Non-homologous end-joining
108244487 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108244487 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108244487 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108244487 (zgc:110269)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
108244487 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
108244487 (zgc:110269)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
108244487 (zgc:110269)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108244487 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
DPRP
Motif
Other DBs
NCBI-GeneID:
108244487
NCBI-ProteinID:
XP_017286221
UniProt:
A0A3Q2ZZJ2
LinkDB
All DBs
Position
LG20:complement(22015079..22024200)
Genome browser
AA seq
346 aa
AA seq
DB search
MGITKLSDLIRSSAPGAVSYKDISDYTGKVVALDTSVALNQFRTATPLFSPITGLFFRTL
TFLEHDIKPVFVFDGTPPEEKTPVLERRAEAAGWSSPKRTGAASSQTRSCVELLKHLGVP
VVQAPGDAEALCARMVRDGTADAVASEDMDTLPFGANVLVRQLNAKKDSEVIEYSLPKLL
DKLQISHEELVDLCILLGCDYCDKIPGLGPSRALSLIQKHHTIEEVVLHVNRQTHPVPHF
WKYKEARKIFLEAPQITVPELIWTEPDEEALVRFLCHTHRIREERVRHRMKTFRDNRENR
REAREKEKAAGSNRQTRMEDFFRVTRKRDQPLEVPSSLGDTKKRRR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcaccaaactgtctgatttaatccgctcaagtgctccaggtgcggtttcttac
aaggatatcagtgactatacaggaaaagtcgttgctctggatacctctgttgctctgaac
cagttccgaacagcaacacccttattcagccccatcactggtctcttcttccgcacactc
accttcctggaacatgacataaagccagtctttgtgtttgatggaacccctcctgaggag
aagacacccgttctcgagaggagagctgaggcagctggttggagctcccccaaacgtacg
ggagcagcgtcatctcagaccagatcatgtgtggagctcctgaagcatctgggtgtgcct
gtcgtccaggctccaggggacgctgaggcgctgtgtgcccggatggtgcgagacgggaca
gccgacgctgtggcctcggaggacatggacacgctgccctttggggcgaatgttctcgtt
cgtcagctgaatgctaaaaaagacagtgaggtcattgaatactccttacccaagctgctg
gacaaactccagattagtcatgaggagcttgttgacctctgtattttgctgggttgtgac
tactgtgacaagatacctggtctgggtcccagcagggctctgagcctgatccagaagcat
cacactattgaggaagtggttttgcacgtcaatagacagacccatcctgtaccacatttc
tggaaatacaaagaggcaaggaagattttcttggaggcaccacagatcacagttcctgaa
ctcatctggactgagccagacgaagaagccctggtcaggttcctctgtcacacccaccgc
atcagggaggagagggttcgtcatcgaatgaagacgtttcgtgacaatcgagaaaatagg
cgggaggcgagggaaaaggagaaggcagcaggaagtaacaggcagactcgaatggaggac
ttctttagagttaccagaaagagggaccaacctttggaagttccatcttcattaggtgac
acaaaaaagagacgaagatga
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integrated database retrieval system
