Kryptolebias marmoratus (mangrove rivulus): 108244508
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Entry
108244508 CDS
T05608
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108244508 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108244508 (rpap2)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108244508 (rpap2)
Protein phosphatases and associated proteins [BR:
kmr01009
]
HAD phosphatases
Fcp/Scp phosphatases
108244508 (rpap2)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108244508 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
108244508
NCBI-ProteinID:
XP_017286256
LinkDB
All DBs
Position
LG20:22352266..22368934
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AA seq
689 aa
AA seq
DB search
MSAVRGQREENKKSSMESAERRKSPAKTSRKGGGKPGKTLTAEEEARRREAVKERLRERL
ELERRALQVVERFLEDRVSEDFLLDSAKFITLANYKDTVEERFITKLCGYPICPNKLGKI
PTQQYKISTKTNRVYDITERKCFCSNFCYKASKEFELQISKTPLWLRQHESPPEIKLLKT
GDGGSSGEEVMLSERRLKEDDVENPQATLPENLHGSPQIPTGGDSSDGEQEQDFVSSVLS
QQDRPSVHWGDMQKRSDQDKKVEQRRKQNREGFKKETERHQIHNTEEENVLRDENERSEP
EADKLHTLNTHQERDSLEDQSVEEATAKINECSLSETDIPNTHTETENKASLTSRSSTGT
TPSSGSKHGPSTALTASEQNSHNPAGLSITQVGMSKKGAAGLRDLLKNHAAETKPDSVRL
SLLEGLKTTLKEWCTEETLKFLYGDGHSLVSSFANEEEEKGEEEELDEDDLDDDVTAAVA
RGQKRPSTPAPDYELLRRQTEQLELRVREFYKGAWLLPEEEQRLDGNKQTTVQDQITSDP
ALPLIDSHAQHLIQKRIVVEKLNSCSRSRCARKLGPNRAVPFGYFTFVFLRSVVGPLGLT
LSDISTDLNNLVRTFRFSNTNIGHRTPEWTLVAVVLLHLLSEVSPVVQDALETSASVQYL
NTLMEELDLQEQDLLSLVQMFKPPTHPHQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggtcagaggtcaacgggaagaaaacaagaaaagcagcatggagtcggcagag
aggaggaaaagtccggctaaaacctccaggaaaggaggagggaaacctggtaaaactctg
accgccgaagaagaagccagacggagagaagcggtgaaggagaggctgagggagaggctg
gagctggagaggagagccctgcaggtggtggagaggttcctggaggacagggtgtctgag
gacttcctgctggactctgcaaagttcatcactttagctaattacaaagacactgtggag
gagagattcatcaccaaactgtgtggctatcccatatgtccaaataaactcggcaagatc
cccacacaacagtacaaaatatctactaaaacaaacagagtgtatgatatcacagagcgc
aagtgtttttgcagtaacttctgctacaaagcctccaaagagtttgagctgcaaatatca
aagacgcctctttggctcaggcagcatgaaagtcctccagaaattaagttactgaagacg
ggagatggtgggagctcgggtgaggaggtgatgctgtcagagaggcgcctcaaagaggac
gacgttgagaacccgcaggccactctacctgaaaaccttcatggctctccgcaaatccct
acaggaggtgacagcagcgacggtgaacaggagcaggacttcgtctccagcgtgctctcc
cagcaggacagaccctctgtgcactggggcgacatgcaaaaacgctcagatcaagacaag
aaagtcgaacaaaggaggaaacagaacagagaaggatttaaaaaagaaactgaacgccat
caaattcacaacacggaggaagaaaacgtattgagagacgagaatgaaaggagtgagcca
gaagctgacaagcttcacacattaaatactcatcaggagagagactcccttgaggaccaa
agtgtggaagaagccactgcaaagataaatgaatgtagtttgtcagagacggacattccc
aacacacacacagagaccgaaaacaaagcgtcactcacctctcgctcgtctacaggaact
acaccgtcatcaggaagcaaacacggcccttctacagctctgactgcctctgagcagaac
agccacaacccagcaggtctcagcatcacccaggtggggatgagcaagaaaggagcggcc
ggcctgcgggatctgctgaagaaccacgccgcagaaaccaaaccggactcggtgcggctc
agtctcctggaaggtctgaagacaacgctaaaggaatggtgcacagaggagaccctcaag
ttcctgtatggtgacggccattcactggtttcctcctttgccaatgaggaagaagagaag
ggagaggaagaggagttggatgaagatgatctagacgacgacgtgacagcggctgttgct
cgagggcaaaagaggccatcaactccagcgccggactatgagttgctgcggaggcagacg
gaacagctggagctccgagtcagagagttttataaaggggcgtggcttctgcctgaggag
gagcagaggctggatgggaacaagcagacaacagttcaggaccagatcacgagtgacccc
gctctgccgctcatcgactctcacgctcagcacctcatccagaaacgaatcgtggtggag
aagctcaacagctgctctcgttctagatgtgccagaaaattaggtccaaaccgagctgtt
ccttttggatacttcactttcgtttttctcagaagcgttgtaggtccactgggcctcact
ttgagcgacatctccactgacctgaacaatctggtccggaccttcagattctccaacaca
aacatcggccacaggactcctgagtggaccctggtagctgtggtgctcctgcatctgttg
tcggaggtgtctccggtggtgcaggatgccttggagacgtcggcatccgtgcagtatttg
aacacgctgatggaggagctcgacctgcaggagcaggaccttctcagcttagtccagatg
tttaagcccccaacacatccacaccagtag
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