Kryptolebias marmoratus (mangrove rivulus): 108244548
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Entry
108244548 CDS
T05608
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108244548 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108244548 (ppil2)
03110 Chaperones and folding catalysts [BR:
kmr03110
]
108244548 (ppil2)
04121 Ubiquitin system [BR:
kmr04121
]
108244548 (ppil2)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108244548 (ppil2)
Spliceosome [BR:
kmr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108244548 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
108244548 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
108244548 (ppil2)
Chaperones and folding catalysts [BR:
kmr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108244548 (ppil2)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
U-box type E3
108244548 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
108244548
NCBI-ProteinID:
XP_017286344
UniProt:
A0A3Q3A4G9
LinkDB
All DBs
Position
LG1:30290000..30327510
Genome browser
AA seq
526 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTNFYGGKRAEIPQANFRRLSFDHCSLSLQPFEYPVCTEDGVV
FDLLSIVPWIKKYGTNPISGEKLEAKSLIKLNFAKNSDGKYHCPVLYNVFTNNSHIVANK
VTGNVFSHEAVEQLNIKTKSFKDLLTDEPFTRKDIITLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKARQDPAYHLKSTNLETRETLAELYKDYKGDQLLASTMKEPEAKKTDKLNAAH
YSTGRVSASFTSTAMTPATTHEADAIADDAVRYQYVKKKGYVRLHTNLGDVNLELHCDKV
PKAGENFIRLCKKGYYDGTIFHRCIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCTYLDRKHSVFGRVVGGFETLTAMESVECNTKTD
KPKSEIKLISTSVFVDPYEEADAQIAAEREKELQKREEEQQQASVVLKKAKEEQAPKTFK
AGVGKYINPASVKRSAAEDEGGPSTSGAAAAKKSKGKSNFGDFSSW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagcgacagcaccaaaaagacaaaatgtacatcacatgtgcagaatacacaaac
ttttacggaggaaagcgggcagaaatcccacaagcaaacttcagacggctttcgtttgac
cactgcagcttgtcccttcagccgtttgaatatccggtctgcacggaggacggagtcgtt
ttcgacctgctgagcatcgttccgtggattaagaagtatggaactaatcccatctctgga
gaaaaactggaagcaaagtctctcattaaactcaactttgccaagaacagcgatggaaag
tatcactgccctgttctgtacaacgtcttcacaaataactctcacatcgttgccaacaag
gtcaccggaaacgtcttttcacacgaggctgttgagcagctgaacattaagaccaaaagt
ttcaaagacctgctgacggatgaacccttcaccagaaaggacatcataacgcttcaggac
cccaccaacctggataaatttaacgtgtccgactttttccacgtgaagaacaacctgaaa
gtgctggaccccgacgaggagaaggcccggcaggacccggcgtaccacctgaagagcacc
aacctggagaccagagagaccttagctgagctctacaaggactacaagggggaccagctg
ctggcgtccaccatgaaggagcccgaggccaagaagacggacaaactgaacgctgcccac
tactccacaggcagagtttctgcctccttcacgtccacagccatgactcctgcgacgaca
cacgaggcagacgccatcgcagacgacgcggttcgttaccagtatgtgaagaagaaaggc
tacgtccgtctgcacacaaacctgggagacgtgaacctggagttgcactgcgataaggtt
cccaaagcgggagagaatttcatccgcttgtgtaagaaaggctactacgacgggacgatc
ttccacaggtgcatcaggaatttcatgattcaaggaggagaccccaccggaaccggcaca
ggtggggaatccttctgggggaaacctttcaaagatgagtttcggcccaacttgtctcat
acgggccgaggagttctcagcatggccaactctgggccgaacaccaacaagtctcagttc
ttcatcacattccggtcctgcacctacctcgacaggaaacacagcgtatttggaagggtc
gttggaggctttgagacgctcaccgccatggagagcgtggagtgtaataccaaaacggac
aaaccgaagtcggagatcaagctcatcagtaccagcgtgttcgtggacccgtacgaagag
gccgacgctcagatcgcggcggagcgcgagaaggagctgcagaaacgggaggaggagcag
cagcaggccagcgtcgtcctgaagaaggccaaggaggagcaggcgcccaaaaccttcaag
gccggagtggggaaatacatcaaccctgcctccgtgaaacgctctgctgctgaggatgaa
ggcggaccgtccaccagcggcgccgctgcagccaagaagtccaaaggaaagtccaacttc
ggcgacttcagctcctggtag
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