Kryptolebias marmoratus (mangrove rivulus): 108244588
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Entry
108244588 CDS
T05608
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04110
Cell cycle
kmr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108244588 (smc1a)
04114 Oocyte meiosis
108244588 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108244588 (smc1a)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108244588 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
108244588 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
108244588
NCBI-ProteinID:
XP_017286400
UniProt:
A0A3Q2ZT34
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All DBs
Position
LG8:complement(17853967..17862924)
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDDGEERSFTRVIIGSSSEYRINNKVVGLPDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIEKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVEMAKQDFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSTVLAKEALIEIDYSILSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSMQNFQAVVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDASSNANE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctatttaaagctaatagaaatcgaaaactttaagtcgtacaaaggaagacaaatc
attgggccgtttcacaagtttactgcaatcatcggacctaatggatctggaaaatccaac
cttatggatgccatcagcttcgttttggcagaaaagaccagtaacctgcgtgtcaagact
ctgaaggatctaatccatggagctcctgtaggaaagccagctgccaacagagcctttgtc
agtatggtgtaccaagaggatgatggagaggaacgctccttcacaagggtcatcattggt
tcctcttctgagtaccgcatcaacaataaggtggtgggccttcctgactacagcgaggag
ctggaaaaactaggaattctgatcaaggctaggaattttctagtctttcagggagctgtg
gagtcgattgccatgaagaaccccaaagagcgtactgcgctttttgaggagatctcacgt
tccggagagctggcccaggaatatgaccggaggaaaaaagagatggtgaaagcagaagag
gacacgcagttcaattatcaccgcaagaaaaacattgctgcagagcgcaaagaagccaag
caagagaaagaagaggctgagaggtaccagcgccttaaagatgaagtagccagggccagc
gtacagctacagctcttcaagttgtatcacaacgagactgagattgaaaagctgaacaaa
gagctaggccaacggaacaaagaaattgagaaggaccgtaaaaagatggaccatgtggaa
gaggagctgaaggacaagaagaaggagctgggcaggctgatgagggagcaacagaccatt
gagaaagaaatcaaggagaaggactctgagttgaaccaaaagaggcctcaatacatcaag
gccaaagagaatacttcacacaaaataaagaaacttgaggcagcacgaaagtcattgcag
aatgctcaaaagatgtacaagaagcgcaaagcagacatggatgagctggataaggagatg
agggcggtggaaatggccaagcaagattttgaggaaagaatggaggaggaggcacagagc
cagggccaggacctcactctggaggaaaatcaggttaagcagtaccatcgtttaaaggaa
gaggccagtaaacgcgctgccactctggctcaggagctggaaaagttcaaccgtgatcag
aaagccgaccaggaccgccttgacttagaggagaggaagaaagtggagacagaggccaaa
atcaaacagaagatccgtgaaattgaggaaaaccagaaacgtattgagaaattagaggat
tatattgcaactagcagacaatcacttgatgaacagaagcgcatggaggaggagctgacg
gaggaggtagagatggccaagaggaggattgatgagatcaacatggagcttaaccaggta
atggagcagctgggagacgccagaatcgacaggcaggaaaacagccgacagcagcgcaag
gcagagatcatggagagtatcaaaaggctttatcctggctctgtgtacggccgtttgatc
gacctgtgtcaacccactcagaagaagtatcagattgctgtcaccaaagtgttgggcaag
aacatggatgccatcattgttgactcggagaagacgggcagagactgcattcagtacatc
aaggagcagagaggagagcctgagaccttccttcctctcgactaccttgaggttaaaccg
acagatgagaaattgagagagctgcgaggggccaagctggtgattgacgtgatccgctat
gagccgccccacatcaagaaggccctgcagtacgcttgtggcaacgctctggtttgtgag
aacgtcgaggatgcacgaaggatcgcttttggagggccttacagacacaagacggtggcc
ctggacggtactctgttccagaagtctggagtcatctctggaggagccagcgacctgaaa
gccaaggccagacgttgggatgagaaggcagtggacaaactcaaagagaaaaaagaaaaa
cttacagatgagctcaaggagcaaatgaaggcaaagaggaaggaggcagagctacgtcag
gtgcagtctcaggcacatggtctgcagatgagactgaagtactcccagagtgatctggag
cagacgaaaaccagacacctgtcccttaacatgcaggaaaagtccaaactggagagtgaa
cttgcaaactttggccctcgcatcaatgacatcaaacgcatcatccagtcccgcgaacga
gaaatcaccgacctccgggaccgcatgaacctggtggaggacgaggtgtttgttgaattc
tgtaaggagattggagtgaggaacatccgagagtttgaggaggagaaagtgaagaggcag
aatgagattgcaaagaagcgtcttgagtttgaaacccagaagacccgtctgggaatccag
gtggactacgagaagaaccagctgaaggaggatcaggagaaggtcatgatgtgggagcaa
actgttaagaaagacgaagctgaaatagaacgactgaaaaaggaggagcacaggcacatg
aaaatcattgatgagacaatggcccagctgcaggacctgaagaaccagcacctcacaaag
aagtccgaggttaacgataaaaaccatgagatggaggagatccgcaaaaaactgggaggc
gccaacaaagagttgacccagctccagaaggaggtgacagccattgagaccaaactggag
cagaagcgcagtgatcgccacaacctgctgcaggcctgcaagatgcaggatatcaggttg
ccgcttcgctcgggaacaatggatgatatcagccaaggagaggggagctcccagacagat
gagtccagcagccagaggacatccagcactgttctggctaaggaagccctaatagagatc
gactacagcatcctatctgaagacttgaaggatgcattgtcagaggaggagataaaggca
gagacaaacacactccagcagcgtctgaatgaacagcagagtatcctgcagaggatcagt
gcacccaacatgaaagccatggagaaactcgagagtgtccgggacaagttccaggagacc
agtgacgagtttgaggctgctcgtaagagagccaaaaaggccaagcaggcctttgagcag
atcaagaaggagcggtttgatcgttttaatacctgtttcgagtctgtggccaccaacatc
gacgagatctacaaagcactgtcgcgcaacagcagcgctcaggcttttctaggcccagaa
aacccagaagaaccatatctggacggtatcaactacaactgtgtggctccagggaagagg
ttcagaccgatggataacctgtcaggaggagagaagacggttgctgccctggctctgctg
tttgctattcacagctacaaacctgcccccttctttgttctggatgagattgacgccgct
ctggacaacactaatatcggcaaggtggccaattacatcaaggaccagtcgatgcagaac
ttccaggccgtcgtcatttctctgaaggaggagttctacaccaaggcagactcactcata
ggcgtctatccagagcaaggagattgtgtcatcagcaaagtgctcacctttgacctctcc
cagtacccagacgccagctcaaatgcaaacgaataa
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