Kryptolebias marmoratus (mangrove rivulus): 108244633
Help
Entry
108244633 CDS
T05608
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108244633
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108244633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
108244633
NCBI-ProteinID:
XP_037830469
LinkDB
All DBs
Position
LG2:complement(15521654..15534959)
Genome browser
AA seq
1022 aa
AA seq
DB search
MPAGVSLREDMQVYCWGDGSCGQVGPRAALSPTCWSVPGLPSSISCGERHTLLLKADGKV
LSCGQNSRGQLGRRNQSGKMLGCVESLGNVVATACGQDHCLALCASGHVFAWGAAEGGQL
GLSAGQLHDTQRPSRVPIPMAIQIIQVACGNTHSLALTKGGDVFSWGSNSHGQLGLGKEA
LRHLLPVPVLALNGVAVTQISAGGAHTLFLTLPGLVYCCGANKHGQLGLNRVDEKGRFNI
CMVPALRALSVSFISCGESHTAVLTKEGKVFTFGEGSSGQLGHNSAADEVRPRLVDGLGG
PASQIACGRRHTLVLSSSGQLWAFGSGDKGQTGTEQREDSLSPALVQLPWTSDGATAVPA
DLKISAGWNTNFIYSSSAKVVGNGQITGRLDEAKLQRWLTMRHSNVETKREIGSMFLTGS
SLVASFTKVNGTPLEAGALTVDLEAASQAFDQMLAVPWIKQSVNLGLLIDSLFASTAALK
CPEIFLVLLTCPLLQEDSSVMAGALTLAIAIADLSEKTRAALKSWWSSLSAPLLMKHIMV
FKNALAFMLKNGLIVTHNPGVKYLLEALKLLYKANKTGKSYTVPLNSFYVEEINTAIYPH
EDVTLWLAFSKQEDEDTPVIFCRYPFVFPLICKTAVFNILARIMKEAHHVIYNMGVEWPE
QWFLDAPESSCAPVFQLTLRRTHLVEDTFRQLAATDHSVFKRELLVLFKDDRKLMNVNKK
DLFLHLFDELMAPESEMFVYNESKTLAWFPPKPKVEEKKYFLFGVLCGLALYNHNIIHLP
FPLALFKKLLRVKPSLDDLKEFEPVLAESWRCILEDYSPDQVEDLELPFTMPWGGEDIEL
DPNEAGKCVTWSNRHEFVAACVNHIFNKSVEGPFELFKSGFFKVCNIDVVEFFQPEELQS
VVVGHEDYNWEVFKQNTVYEGDYHASHPNIITFWEVFENLTAEEKKKFLLFLTGSDRVPF
LGMEYVKMKVAVLPDATERHLPESLTCHALLLLPIYKRYPVERTMEARLRQAINHNRGFW
RK
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctggggtcagtctgcgtgaagacatgcaggtgtactgttggggagacggctcc
tgtggacaggtcggacctcgggcggcccttagcccgacctgctggtctgtccccgggcta
ccgagcagcatcagctgcggggagcggcacactttactcctgaaagcggacgggaaagtt
ttgtcatgtgggcagaactcgcggggccagcttggccgaaggaaccaaagcggaaagatg
ctaggctgtgtggagagtctaggcaatgtggtggcgacggcctgtggccaggatcactgt
ctggctctgtgcgcatccgggcacgtgttcgcctggggggcggcagaaggcgggcagctg
gggctgtcagcggggcagcttcacgacactcagaggccgagccgggtgcccattccaatg
gccatccaaataattcaggttgcttgtggaaacacccattccctggcattgactaaaggc
ggagacgtcttctcatggggctcaaacagtcacggtcagctgggcctggggaaggaggcg
ttgcgacacctgcttcccgtcccggtgctcgccctgaacggcgtagcggtgacccagatt
tcagccgggggagcccacacgctgttcctcacgctccccggtttggtgtactgctgcggt
gccaacaagcacggccagctggggctcaacagggtggacgaaaaaggcaggttcaacatc
tgtatggtacctgcactcagagctctgagcgtctccttcataagctgcggagagtcacac
actgctgtgctaacaaaggaagggaaggttttcacttttggagaaggaagcagcggtcag
ctcggtcacaactccgccgccgacgaagtcagacccagactggttgacggtctcggtgga
cccgcgtcacagattgcatgtgggaggcgtcacactctggttttgagttcctccggccag
ctgtgggcatttggcagtggggacaaaggacagacggggactgaacagcgagaggacagt
ctgtctccagccctggttcagcttccgtggacctctgacggcgccacggcagtaccagct
gacttgaagatctcagctggatggaatacaaactttatttactcttcgtccgcaaaggtt
gtgggtaatgggcagattaccgggaggctcgatgaggccaaactgcaaagatggttaacg
atgagacacagcaacgttgagacaaagagagaaattgggtcgatgtttctgacgggatcc
agcctcgttgcgagctttaccaaagtcaacgggactccgctggaagcaggtgccttgacg
gtggaccttgaagctgccagccaagctttcgaccagatgttggcagtcccatggatcaaa
caatcagtgaatctaggtctcctgatagactcgctctttgcctcgacagctgcgctgaaa
tgtccagagatcttcctggtgttgctgacgtgccccctcctgcaggaggactccagcgtg
atggccggagctttgactctggcaatcgcaatagcggacctcagcgagaagactcgagca
gcactaaaaagctggtggtcttctctgtcagcccctttactgatgaagcacatcatggtt
ttcaaaaacgccctggctttcatgttgaagaatggcctcatagtaactcacaacccagga
gtgaaatacctgctggaagccctcaagctgctctacaaagctaacaaaactgggaagtcc
tacactgtcccgctgaacagcttttatgtggaggaaatcaatactgctatctatccacac
gaggatgtcactctttggttggcgttcagtaaacaggaggacgaggacacacccgtcatt
ttctgccgctaccccttcgttttcccgctgatttgcaagactgcggtgtttaacatctta
gcgcgcataatgaaggaagcacatcatgtcatttataacatgggtgtggagtggcctgag
cagtggttcttagacgctccggagtcgtcttgtgctccagttttccagctgactctgaga
cggacacatctggtcgaggacaccttcaggcagctcgctgcaaccgatcactctgtcttc
aaaagagagcttttggtgctgtttaaggacgacaggaagctgatgaatgtgaacaaaaag
gaccttttcctccacctgtttgacgagctgatggctcctgaatctgagatgttcgtgtac
aacgagagcaagactctggcctggttccccccaaagccaaaagtggaggagaagaagtac
ttcctgtttggtgtcctgtgtggcctggctctttataaccacaacattatacacctgcct
ttccctctggctctcttcaagaagctgctccgagtcaaaccttcactggatgacctgaaa
gagttcgagcctgttctggcagagtcttggaggtgcatattggaggactacagtcctgat
caagttgaagacctggagcttccttttactatgccttggggtggtgaggacatcgaacta
gatccaaatgaagctggaaaatgtgtcacgtggtcaaacaggcatgagtttgttgccgcc
tgtgtcaaccacatcttcaacaagtcagtggagggaccgtttgaactgttcaagtcgggt
tttttcaaagtgtgcaacatagacgtggtggagttcttccagccggaggagctgcagtca
gtggtggtgggccatgaagactacaactgggaggtcttcaagcagaacacggtttatgaa
ggagactaccatgccagccatccgaacatcattaccttttgggaggtgtttgagaacctg
acagcagaggagaagaaaaagtttcttttgttcctcacaggtagcgaccgagtgcccttc
ctgggaatggagtacgtcaagatgaaggtggccgtgctgcccgacgccaccgagcgccat
ctgccagaatcgctcacctgccacgctttgttgctgctccccatctacaagagatacccg
gtggagaggacgatggaggccaggcttcgtcaggccatcaatcacaacagaggcttctgg
aggaagtag
DBGET
integrated database retrieval system
