KEGG   Kryptolebias marmoratus (mangrove rivulus): 108244809
Entry
108244809         CDS       T05608                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03420  Nucleotide excision repair
kmr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108244809 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108244809 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kmr04121]
    108244809 (ercc8)
   03400 DNA repair and recombination proteins [BR:kmr03400]
    108244809 (ercc8)
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108244809 (ercc8)
DNA repair and recombination proteins [BR:kmr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108244809 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_C NBCH_WD40 ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_RFWD3 WD_LRWD1 Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 108244809
NCBI-ProteinID: XP_017286794
UniProt: A0A3Q3AT80
LinkDB
Position
LG1:complement(21836529..21847479)
AA seq 401 aa
MLGFLTARQAGLDDPLRLRRAESTRRVLSLKLNPDRDVDRVHGNGINTIDIETIEGRYML
SGGADGVIVIYDLENYSRKLQYSCKALCTVGRSNRHVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTDTLKPADVFEFEGNVYSHHLSPIARKHSLIAVGTTNPKIQLCDLKSGSRIH
VLQGHRAEVLSVRWSPRYEHILATASADSKVKVWDVRRASGSLFTLDQHNGEKSKASSET
VNTAHNGRVNGLCFTLDGLYLLTTGTDDRMRLWNSASGENTLVNYGKVCNESRKKLQFSV
SRGCSPEFVFVPCGSSVAVYALHTGELVTMLRGHYNNVDCCEFHPDYQELYSGGKDSNIL
AWVPVLRTPDIEEESNHENKGAAGLSAVNPAFQDAWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgttgggatttctgacagcaagacaagctggtctggacgacccgttgcgactgagacga
gcagaatcaacgagaagggtccttagtctgaagctaaatcctgacagagatgtggatcga
gtccatggaaatgggattaataccattgacattgaaacaattgagggcagatacatgttg
tctggaggtgctgatggagtaatcgttatctatgacctggagaactacagtaggaaactg
cagtactcctgtaaggctctctgtactgtaggcaggtcaaaccgacatgtccacaaattc
agcgtagagacagtccagtggtatccttatgacacagggatgtttgtctcgagttccttt
gacaagaccatgaaagtttgggacacggatactttaaagcctgctgatgtgtttgagttt
gagggtaatgtctacagtcaccacctgtcccccatcgccaggaagcacagcctcatcgca
gttggcaccacaaaccctaaaatccagctttgcgacttgaagtctggctcacggattcat
gttcttcagggtcacagagcagaagtgctgtctgtgcgctggtcgcccagatacgagcac
atcttagccactgccagtgcagacagcaaagtgaaagtgtgggatgtgcgacgagcttcg
ggtagtctcttcactttggaccagcacaacggagagaagtcaaaagcctcttcagagaca
gttaacacagcccataatggcagagtgaacgggctctgctttactttggatggtctctac
ctcctaaccactggaacggacgaccgcatgcgactatggaatagtgctagtggggaaaac
actctggtaaattatggaaaggtctgtaacgagagtcgtaaaaagctgcagttcagcgtg
tcccgcggctgcagcccggagttcgtgttcgtgccctgcggcagctcggtggccgtctac
gccctccacacgggagaactcgtcacgatgctcaggggtcactacaataacgtggactgc
tgcgagttccacccagactatcaggagctgtacagcggaggtaaagacagcaacattctg
gcgtgggtccccgtccttcgtaccccagatatagaagaagagtcaaatcatgaaaataag
ggtgctgccggtctgtctgctgtgaaccctgcctttcaggacgcctggagcagcgatgaa
gactga

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