Kryptolebias marmoratus (mangrove rivulus): 108244852
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Entry
108244852 CDS
T05608
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108244852 (kcnn1a)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
108244852 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DALR_1
Motif
Other DBs
NCBI-GeneID:
108244852
NCBI-ProteinID:
XP_024865163
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Position
LG20:complement(23313471..23426452)
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AA seq
990 aa
AA seq
DB search
MRHRCAGAVHQHHILDGKPGTHESSRDRVAPVFSLPPPPSSHHRVRTSTTAAQRQSLQEL
PCLSQPSRRPVHSGDPLPLASYDTSRRPSHRGGEASAGQPAHLQQQQDPWAPAGSQQQQQ
PPQSEGEPVFPSCHCSFSEQDASFSQNQPLSADPLPPQPSPPFPPPIPPPPAFSSRGSDR
GDRLRRSANNYQQASIVERCRGGGGAGGHRDHRQLLQQQQQQQQQHCHLRLQQRDPSPEG
SRGNSQKGRSLNACNSTEDQRAFESQTQDPQQQQIPQLRAQQQLLVGSSLPVNYCASGSG
EPCRTQRAPLLKQPRQGAPPGVCPQRLQQQHCEQDCNKCGKISGPTDRAQPHGRVTPPAA
PHAHTGNWSATGSRSSKDSPNYGSSYHLWPESPHKGEERIRINLHKANTEQKKLSHAGSK
PSLSESSSRLPQIAMNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEV
VVSKGNAGEDPSKASNESLIREGGGRGGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYA
LIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMV
DNGADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIIL
SIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFS
ISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLT
GIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTK
LVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSE
LQERSEELDKRIGTLEDKLDSVAGSLQALPCLISQAITQQQQDFMDGFVHRFRPASLASE
RSEHSERSWTSTTRRRRSPSTAPHTSSDSG
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtgcgcgggagctgtccatcagcaccacatcctcgacggaaagccagga
acccacgaatcgagccgagaccgagtcgctcccgtttttagcctgccgcccccgccctca
tctcaccacagagtccgcacttcgaccaccgccgctcagcgccagagcctccaggagctg
ccgtgtctgagccagccctcccggagacccgttcacagcggagaccccctcccgctggcg
agctacgacaccagccggcgaccttcacaccgagggggcgaagcgagtgccgggcagccg
gcacacctgcagcagcagcaggatccgtgggccccagccggctcccagcagcagcagcag
ccgccgcagtccgagggggagcctgtttttccgagctgccactgcagcttttcggagcaa
gacgcgagcttctcccaaaaccagcccctctctgccgaccctctcccaccgcaaccctcc
ccaccttttcctccacctataccgccgccaccagccttctcctcccgcggatctgacagg
ggagatcgcctcagaaggagcgccaataattaccaacaggcgagcattgtggaacgctgc
agggggggaggaggagcgggagggcaccgagaccacaggcagctgttgcagcagcagcag
cagcagcagcagcagcactgtcatctaagactccaacagagggacccctcccctgaagga
agccgtggaaactcacagaaagggcgctctttaaatgcatgtaactccaccgaggatcag
agagcgttcgagtcccagactcaggacccgcagcagcaacagatcccgcagctgcgagcg
cagcagcagctactggtggggagcagcctgcctgtcaactactgcgccagcggctccgga
gagccatgtaggacccagcgggctcctctgctaaagcagccgcggcaaggcgcgccgccg
ggggtctgcccccagcgtctgcagcagcagcactgtgaacaagactgcaataagtgcggg
aaaatcagcggacccaccgaccgagcgcagccgcacggccgcgtaacccctccggcagca
ccgcacgcgcacacggggaactggtctgcgactggcagccgcagcagcaaagacagcccc
aactacggctccagctatcacctgtggcccgagagcccgcataaaggagaggagaggata
cgcatcaacctccataaggccaatactgagcagaagaagctgagccatgctggatccaag
ccctccctctccgagagcagcagccgactccctcagatagccatgaacacctgcaaatac
aatggcggcgtggtcagaccactagtgggcagcctggcgtcctcgtcgcgccgcaacctc
gctgagctcgactcggagacacagcccctgcagacgctgcacagttccggcctggaggtg
gtggtgtcaaagggcaacgctggtgaagaccccagtaaggcatccaacgagagcttaatc
agggagggcggcgggcgaggtgggggcagggctccccagaagaagaacagggacattggc
tacaagcttggacatcgtcgggcgctgtttgagaagaggaagcggctcagcgattacgca
ctcatctttggaatgtttgggattgtcgtcatggttacagaaacagaactatcatggggg
gtttacactaaggaatcttcatactcatttgcactgaaatgccttatcagcctttccact
gttattttgctcggtcttataataatgtaccacgcccgggaaatccagctgttcatggtt
gacaatggcgcagacgattggaggatagccatgacatatgagagaatcttcttcattgtg
ctggagcttttggtgtgtgccattcatcccatcccaggccagtacgtcttcacttggaca
gcacggctggccttcacctacacgccatctgtggctgatgccgacgtggacattatcctc
tctatccccatgttcctgagactctacctgatcggcagggttatgttactccacagcaag
ctgttcacggatgcttcgtcccgcagcattggtgccctcaacaagatcaacttcaacacc
cgctttgtcatgaagaccctcatgaccatatgtccaggaacagtgttgctggtgttcagt
atatcctcctggatcattgctgcatggactgtgcgtgtctgtgagaggtatcatgacaaa
caggaagtaaccagtaatttcctgggagccatgtggctcatttcgattaccttcctctct
attggctacggtgacatggtaccacatacgtactgtgggaaaggcgtgtgtctacttaca
gggatcatgggtgctggttgcactgcgttggtggttgcagtggttgccaggaagctggag
ctgaccaaggctgagaagcatgtccacaacttcatgatggacacacaactctgcaaaaga
gtaaagaatacagctgccaatgtactcagggaaacatggctcatttacaaacacaccaag
ttggtcaagaagatagatcacgccaaggtgcggaaacaccagcgcaagtttctccaagcc
attcaccaagctcagaaactgcgcagtgtgaagatggagcagagaaagctcaacgatcag
gccaatacattggtggacctagcaaagacccagaatgtgatgtatgacctggtgtctgag
ctgcaggagcgcagcgaggagctggacaagcgcattggcacactagaggacaagctggac
tcggtggcgggcagcttgcaggcactgccctgcctcatctcccaagccataacccagcag
cagcaggacttcatggatggctttgttcaccgctttcgtcctgcctctctagcatcagag
cgctctgaacactccgagcgatcatggacttccaccacacgtaggcggcggtctccatca
acagcgccacacacatcttctgacagtggatga
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