Kryptolebias marmoratus (mangrove rivulus): 108244937
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Entry
108244937 CDS
T05608
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108244937 (cpne1)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108244937 (cpne1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
108244937
NCBI-ProteinID:
XP_017286973
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Position
LG4:3921860..3944042
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AA seq
896 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARQGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFETGAGAVEIAAPTAGNANRQASAASIPPVQ
SGAGGRSGSHGNQSFSNTPTSVTSVSSSQEQPSSKAAPTLANVLPSFHNSYGSALTITTA
LTSLSGGPPPITALPNMPSMPPMPTMPTIPVPPPVSTLPPVPSVNPLSQGPPIPPMSHLP
HMSSLPPFNPSLPPPTGMGSGLPLGTPNPMLFNPLTPLASLGLQAHMKAAAAAATGAAGT
NPDELYVVLQNLHFSCSEMEVRDFFRGLGVDGVRLQRDGHGRPNGRAMVKFFSPQDSFEA
LKLGGGMMGQRFIEISPGSDQQWASLGDSGIGLASHIGTKSSNSNESQDQQHRRGNAGTG
GRDRDRSPHRQEFCVYLKGLPYEANKRQIKEFFKNLVIVEDSIYIAYGPNGRATGEGFLE
FKSEEEYKVALASHMQYMGSRFIQVHPISRKGMLEKIDAIRKREATQGDSKNQDGLKSPR
NCAHISNIPYNISRKDVRAFLEGVGIYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKAER
LHRQKLNGRDAFVHLVTFDQMKEIERNPPPQNKRGQRNQNQHNQNQNHNQQAQPNPQQPQ
INPFVGISGEDFNFLRNTMGNLGSSPFVTPFSAPGNGLAGPPPLPPMPARLGEVNIGVTP
PLVPGIPGAPILEPPGFRPGAAGGPPFGQDALRGIVPFDNTNRKGNTGAQNRGGGGPNNS
QGRPAGGEQVFTPGAEGLCNQPVPGGSTNPSNQHGAAGPTIVKLQNMPFTVTVDEIMDFF
YGYQVLPGSVCLQFNEKGLPTGEAMVAFQNHEEAAAAVMELNDRPIGARKVKISLG
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtcatcaggctccagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggcctcaccattcctgacggtggagtgcacattgtggggggtgaacat
ggtgaagccttcatcgtgtttgccactgatgaggatgctcgacaagggatgatgcgaacg
ggtgggtccatcaaaggctccaaagtgtcactgttgcttagtagcaagacagaaatgcag
aacatgattgaacttagccgccgtagatttgaaactggagcaggagctgttgagatagct
gcacccacagcaggaaatgctaaccgacaagcaagtgcggcctccataccccctgtgcag
tcaggggcaggaggacggtctggtagccatggaaatcagagtttcagtaacaccccaacc
tcggtgacatcagtaagctcatctcaagaacaaccaagcagcaaagcagcacctacccta
gccaatgtgttgccaagtttccataatagctacggctcagcccttacaatcaccacagct
ctgacatcactcagtggaggtcccccacccatcactgcacttcctaacatgccttccatg
cctcctatgcccactatgcccacaattccagttcctcctcctgtgtctaccctccctcct
gtcccttctgttaatccattatcccagggacctccaataccccctatgtctcaccttcct
catatgtcttccctacctccctttaatccctcccttcctccaccaacaggaatgggctca
ggcctccctcttgggacccccaaccccatgctgtttaaccctcttactcctctggcctca
cttggccttcaggctcatatgaaagctgctgctgcagcagccactggggcagcaggaaca
aatccggatgaattgtatgtcgtcctgcaaaatcttcatttctcctgctcagagatggaa
gtcagggatttttttcgcggccttggggtggatggggttcgcctgcagagggatgggcat
ggtcggccaaatggcagggctatggttaagttcttctcaccccaggacagttttgaggct
ttgaagctaggtggtggcatgatgggccaaagattcattgagatcagcccaggctctgat
caacagtgggccagccttggtgacagtgggataggccttgcttctcacattggtaccaaa
tcaagtaacagcaatgagtcacaggatcagcagcaccgccgtggtaatgctgggacagga
ggcagagatcgagacagatcacctcacaggcaggagttctgcgtctatctgaagggtctc
ccttatgaagccaacaaaagacagattaaggagttctttaagaatttggttattgtggaa
gacagcatctacattgcctatggtccaaatgggcgtgctacaggagagggtttccttgag
ttcaaatctgaagaggaatacaaggttgctcttgcctctcacatgcagtatatgggatct
cgcttcatccaggtacatccaatcagtcgaaagggaatgcttgaaaagattgatgctatc
cgtaaacgtgaagcaacacagggtgacagcaagaaccaagatggcttgaaatctcctagg
aattgtgcccacatttccaatatcccttataacatctccaggaaggatgttcgcgccttc
cttgaaggtgtgggaatctatgaagacaccctgaaagtcctgacagatagccatgggaat
ggtttagggcaagccatcttccagttgcgaactgaggaagatgcccgcaaagctgaaagg
ctgcaccggcaaaagctcaatggccgtgatgcctttgtccatttggtaacctttgatcag
atgaaggaaattgagagaaatcctccacctcaaaacaagaggggtcaacgtaaccagaac
cagcacaatcaaaaccaaaaccacaaccagcaagcccagcccaatccccagcagcctcag
attaacccttttgttggaattagtggcgaggactttaatttccttagaaacaccatgggg
aacctcggcagtagcccctttgtaactccattctctgccccaggaaatggactggcaggc
cctcctcccctccctccgatgcctgccaggctaggtgaagtgaatataggtgttactcct
ccattagttccaggaattccaggagcaccaatcttggagccacctggctttcgacctgga
gctgctggaggacctccattcggccaagatgcacttagaggcattgtaccttttgacaac
accaacagaaaaggaaatacaggagcacagaacagaggaggaggagggcccaacaacagc
caggggcgcccagctggtggagagcaggtgttcactccaggtgccgaaggcctctgcaac
cagccagtcccaggaggatctactaatcccagcaatcagcatggtgctgctggcccaaca
attgtgaaacttcagaacatgccgtttactgttactgtggatgagatcatggactttttc
tacggctaccaggtgctgccaggctcagtctgcttacagttcaatgagaaaggtttgcca
actggtgaggccatggtggccttccagaaccatgaggaggctgctgctgcagtcatggaa
ctcaatgacagacctataggggcacgcaaggtcaagataagcctgggttaa
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