Kryptolebias marmoratus (mangrove rivulus): 108244955
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Entry
108244955 CDS
T05608
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
kmr01001
]
108244955
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108244955
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108244955
Protein kinases [BR:
kmr01001
]
Serine/threonine kinases: Other
Other
108244955
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108244955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_2nd
EIF3I
Mito_fiss_reg
Beta-prop_WDR19_1st
LisH
ANAPC4_WD40
DUF948
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108244955
NCBI-ProteinID:
XP_017287013
LinkDB
All DBs
Position
LG4:complement(3860037..3878756)
Genome browser
AA seq
1603 aa
AA seq
DB search
MRRRARLGQLMAAMSSPPEEPSPSVSSVLSSALAAAVSAAVVVAMAVDAKADLAKLLDEW
EEARRGTTEQLVSILTKISELIERETAEYNKADPDPFDDRHPGRADPDCMLGQLLKMLFM
NDDFTNALLDSYIMSSRELSLNTAACRLLQNIMPALDATVVFEEKEGLIGKLFSWAREAE
RPLCVYATGLLARAISNQEVAAKYREENAQLVSIMINHLRELQTSEATSHFIPTQTAQNL
PQHSQDEAAGTSSVAKKQQDKTKQEDVGEEEEKKEKDGESSSSSRQLPDSSYHGRPDSAS
KKMEVTQGEGGGGAKKQAVKENGRKAKQKLNFTASSRRTEEEGEEEAGRPEISKHPPSSS
SWSEMSSILIGSDYCLSPLSPAMEQRLILQYLTPLGEYQELLAVFMKLDTRSLLMNYIDL
RKTKHVQLTFDALLFLSALLLHKKFAAEFIAHGGVQKLLEIPRPSMAATGVSLCLYYLAY
NLDTMERVCILPDGVLSDLVSYALWLLESSHTSGVCHATIFFSISFSFRAVLQLFDQQDG
LRRLVNLVSTLEILNTENEVSIMNDDQVFSSRQTARHTCMALRRYFEAHLGVKTEQVKQS
LHSSDSGSVVPHQPSYKGCIYTREQVIEMMEFLIEYGPPQFHWEPVEVFYKLSCVPLMLQ
LISTAADWKTYIGRNDIARYALDILAILTVVPKVQLVLADTVEVLDETRSSVSTVGMSII
LGVAEGDVFVNDAEIQKSALQVIINCVCAPEKSLNAVGPFAVTPVRQPLHHQQPPASHNR
VLAHMWQLVQNNNGIKVLLSLLSVKAPITDADLIRALTCKALVGLSRSSAIRQIISKLPL
FTSSHIQQLMKEPVLQDKRSEHVRFCHYAAELTKRVSGKPLLMGTDVSLARLQKANVVAQ
SRITFSEKELLVLIRNHLVAKGLHDTANTLIKEANLPTASLCPNSVTSFVTPSPSASTSI
PRTCRLASGIAARVAGHAGASPVSSSASASRLLAIPQSSSSSASTSAVLTPPPPPPPPPH
PAPNGQGSRPVGRILFTRDHPAANCNSGKKPRALKQKSDHGAFIQTPAMKKQLELHVPSP
PTLDSIITEYLREQHARCRNPVTTCPPFSLFTPHRCPEPKQKRQASPNFTARLGSRVLYP
KYGGVDRGCLDRHLIFSRFRPISVFHEGDGDESGFTCCAFSARERFLMLGTVSGHLKLYN
VFSGEEEANYTCHTSAITHLEPSRNGKLLLTSASWSVPLSALWSMEDVFSMKNTFVDDHY
VEFSKLSQDRVIGTKDQVAHIYDIQTGQKILTLNDPALANNYKRNCATFNPTDDLVLNDG
VLWDVRGSQAIHKFDKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVF
NSNGTIMYGAMLQADDEDDVMDQQMKSPFGSSFRTFDATDYEPIATVDVKRNIFDLCTDT
KDCYLAVIENQDSISLDTICRLYEVGRQKLAEEGDDDQDEEDQDDNDSSDTDDDDDDDDD
DDDDVLDIDPLIQELATIEERENEEQDNQDSATSPADEEIADLLGSSSSDDDNDNDDDDD
DDNSEDSDAEGPDTSLDFFRDGSDDDDEEDSETFQSLPDRWFS
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcgagccagactcggacagctgatggcagcgatgtcctcccctcctgaagag
ccatcacccagcgtgtcttctgtcctttcgtctgcgctggcagctgctgtgtcggctgcc
gtggtggtcgccatggccgtggatgccaaggctgatctcgccaaactgctagacgagtgg
gaagaagcgcggcggggcaccaccgagcaactggtgtccatcctgaccaaaatatctgag
ctgattgaacgggagactgcagaatataacaaagcagacccggatccatttgatgatcgt
cacccaggacgagcggacccagactgtatgctaggacagctgctgaagatgctctttatg
aatgacgacttcactaatgcgctcttggactcatatataatgtctagtcgagagctgagc
ctcaacacggcggcctgtcggctccttcagaacatcatgccggctctggatgccactgtt
gtcttcgaagaaaaggaaggtctcattgggaagttgttcagttgggcccgtgaagctgag
cgaccgctgtgcgtctacgccacaggcctgctggccagagccataagcaaccaggaagtg
gcggccaaatacagggaggagaacgctcagctggtttccatcatgattaaccatctgcgt
gagctgcaaacctcagaggccacaagccactttattcccacccagactgcccagaaccta
cctcagcactctcaggacgaagccgctggaacctcaagtgtcgcaaaaaaacagcaagat
aagacaaaacaggaagatgttggtgaggaggaagagaagaaagaaaaagatggagagagc
agcagctccagtcgccagcttccagactcgtcttaccacggaagaccagattcagcctca
aagaagatggaggtcactcagggagaaggaggaggaggagcgaagaaacaggcagtaaag
gagaatgggaggaaggcgaagcagaagctcaactttacagcctcctccaggaggacggag
gaggagggggaggaggaggcgggcaggcctgaaatcagcaaacatccacccagcagctcg
tcctggtctgagatgagctcgattttgattggctctgattactgcctttccccactgagc
cccgccatggagcagaggctcatcctgcagtatctgacgccgctcggagaataccaggag
ctgcttgcagtcttcatgaaactagacacccggtcgctgctgatgaattacatagacctc
aggaagacaaaacatgtgcagctcacctttgatgctctcctgttcctctctgcgctgctc
cttcataaaaagtttgctgcagagttcatcgctcatggaggagtgcagaaacttctggag
atcccgaggccttcaatggcggcgacaggagtttctctctgcctctactacctggcctac
aacctggacacgatggagagggtgtgcattctcccagacggtgtgctgtcagatctggtg
tcctacgctctgtggttgttagagtcatcacacacctcaggcgtctgccacgccaccata
tttttctccatctccttttcattcagggcagtgttgcaactctttgatcagcaggacggc
ctgcgcagactagtcaatctggtcagtactttggagatccttaacacagaaaacgaggtt
tccataatgaacgatgaccaggtgttctccagccggcagacagccagacacacctgcatg
gctctgcgcaggtactttgaggctcatcttggagtgaagactgaacaggtgaaacagtct
ctgcacagttcagacagtggctctgttgttccccaccagccatcttacaagggttgtata
tacaccagagagcaagtaattgagatgatggagtttcttattgagtatggaccacctcag
ttccactgggaacccgtcgaagtcttctacaagttgtcctgcgttcctttaatgttgcag
ctcatctccacagctgccgactggaagacctacattgggaggaatgacatagcacgctat
gctttagacatcctggctatcctgacggtggttcctaaagtccagttggtgctcgctgac
actgtagaggttttggatgaaaccaggtcatctgtttccacagtaggtatgagcatcatt
ctgggtgttgccgagggcgatgtgtttgttaatgatgctgagattcaaaaatctgcacta
caagtgataataaattgtgtgtgcgctccagagaaaagcctgaacgctgttggtccgttt
gccgttacccctgtcaggcagcctctccaccaccagcagccccccgcctctcacaacagg
gtgctggcccacatgtggcaactcgtgcagaataataatggtataaaggtgcttctgtct
ctgctgtcggtgaaggcgcccatcacagacgcagacctaatccgtgctttgacctgcaag
gctctggttggactctctcgcagttctgccatcagacagatcatcagcaagttgccgctc
ttcaccagcagtcacattcagcagctgatgaaggaaccagtcctgcaggacaaacgaagt
gagcacgtccgcttctgccactacgctgctgagctgaccaagcgagtgtccggcaagcct
ctcctcatgggaactgacgtctccctggctcgtttgcagaaggctaacgtggttgcccag
tcacgcattacattttctgagaaggaactccttgtgctaatcaggaaccacctcgtggcc
aaaggactacacgacacggcaaataccctcattaaagaggccaatttacccacagcatcc
ctctgtccaaactctgtcacctcctttgtaaccccttccccttccgcctccacctccata
cccaggacttgtcggttagccagcgggattgcggctcgtgtggccggccatgctggagcc
tctcctgtgtcctccagcgcttcagcctctcgactgctggccattcctcagtcatcgagc
tcgtcagcttctacctcagctgtcctgactcctcctcctcctcctcctcctcctcctcat
cctgctcctaatggacaaggctcacgtcctgttggccggattttgttcacacgtgatcac
ccagcggccaactgcaactcagggaagaaacctcgtgcactaaaacagaagtctgaccac
ggtgctttcatacagactccagctatgaagaaacagctggagctccacgttccttccccc
ccgaccttggacagcatcatcacagagtacctgagggagcaacacgcccgctgccgcaat
cctgtcaccacctgcccccccttctcccttttcacccctcaccgctgcccggagcccaag
cagaagcgacaggcgtcacccaatttcaccgcccgcctggggagccgggtgctgtatcca
aaatatgggggtgtggaccgagggtgtctggatagacatctgatatttagcaggtttcgt
cccatatcggttttccacgaaggcgacggagacgagagcggtttcacctgctgcgccttc
tcagcccgcgagcgtttcctgatgctgggaacggtctctggtcacctcaaactctacaat
gtcttctctggagaggaggaggccaactacacctgccacacctctgctatcacacacctt
gagccctccaggaatggtaaactgcttctcacctctgcttcctggagtgtccccctgtca
gctctctggagcatggaagatgtctttagcatgaagaacacctttgtggacgatcactat
gttgagttcagtaaactgtctcaggacagagtcatcggcacaaaagaccaagttgctcat
atctacgacatccagacaggtcagaagattctgactctgaacgaccccgccctggccaac
aattacaagaggaactgcgccacctttaaccccaccgatgacctggtgctaaatgatggg
gtgttgtgggatgtgcggggctcacaagccatccataagtttgacaagttcaacatgaac
atcagcggagttttccatccgaacggcctggaggtcatcgttaacacggagatttgggat
ctcaggaccttccacctcctgcacacggttcctgccctggatcagtgcagggtggtcttc
aacagcaacggcaccataatgtacggagcaatgctgcaagctgatgatgaggatgatgtg
atggaccagcagatgaagagtccttttgggtcatccttcagaacctttgatgctactgac
tacgagcctattgccacagtggatgtaaagaggaacatctttgatctgtgtactgatacc
aaggactgctacctggctgtcatcgagaaccaggattcaataagcttggacacaatctgt
cgtctttatgaagtgggccgacagaaattggcagaggaaggagatgatgatcaggatgaa
gaggatcaggatgacaacgattcctcagacacagatgatgatgatgatgatgacgacgat
gacgatgatgatgttctcgatatagaccccctcattcaggaacttgcaactattgaagaa
agggaaaatgaagaacaggataatcaggacagtgctacctcacctgcagatgaggagatc
gcagatcttcttggcagcagcagcagtgatgatgacaatgataatgatgatgatgatgat
gatgataactctgaagattcagatgcagaaggacccgacacaagcctagactttttcaga
gacggatctgatgatgatgatgaggaagactctgaaacgtttcagtccctccctgacaga
tggttttcatga
DBGET
integrated database retrieval system
