Kryptolebias marmoratus (mangrove rivulus): 108244959
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Entry
108244959 CDS
T05608
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108244959 (arid5b)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
ARID
108244959 (arid5b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
108244959
NCBI-ProteinID:
XP_017287023
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All DBs
Position
LG22:19414007..19501375
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AA seq
1177 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFKFHRGGKPRILALGDFFFVRCKPEDPVCIAELQLL
WEERTSKQLLSSSKLYFLPEDTPQGRAVAQHGEHEVIAVSEKVIVRLSDLVKWTVPDFSG
WDNGLKVEPLKPSVLRELGTNGRREGLHRYRESTLTSGLNFKDVQRERSQLGQEEDGRKV
LVLSYPQYCRYRSVLARLREQPSSLLIDHTVLALGGIAALGGSTRILYCRDTFEHPTLLQ
NESICDEFAPNLKGRPRKKKLSISQRRDSQGQAPGQGSSGSTQGSTAVAAQDHSSPESKA
TTKVKPGYKTVPNGRLATAAKQRPAGLGKKSSADDRERAKEREEKSEQKEEKDDEETSEE
SRAEEQAFLVALYKYMKERDTPIERIPFLGFKQINLWTMFQAAQKLGGYELITVRRQWKH
VYDELGGNPSSTSAATCTRRHYERLLLPYERHLKGEQDKPLPLAKPRKQESSQEKASTAG
AKTKAVGAKKLKGPKPGSKKDKGETSQEQTQQDSKGKEENNELSIAVKKEASLQDEPIVI
EEEELHLTLKKEESLAAEQPSSLDCRAPHGGFSLHTGPSPQTKWRQISEGLKANLVGEQQ
TEGHFIPKNLYLSHRWDQNKPAGHVALPEHFSKVKDSIENHGGRVGKVLPMCKQADEQCI
DLSTDSFSEKEDYSVLKKESTQGSGQTAYCKASQGVMSPLAKKKLLSQVCDSNPYSFSLQ
SPPPTATSSLPLILVSERDKEKIKSDEEVVRQRHKGLSDNIPEVAPIFRPSVIQHAQSTK
AHQQSTGGPSERGTAGEPSDTYSCRASHHLQPQASVPWQPYLPRTQTQDGAETTEEKLLQ
SSAAQSRSYAGDCYSSPHLHSLYRQTESCLSKERMPGFGSGERREHYSRDREGSQSFACG
SLEQEGMAYRSHYSDRTQTHGENGEAEDEPRDFTISKPLSQRVSSFSKTPFCGLSYPIMH
HGLDSHPKACRVQPMTISPPKQSSPESSQSFSSPKPAGELPLSSTIRPSKRSLVEPESDD
PPERKVRVVTPIHPASTIRRSDPEELKPAEPALAIHLNNHLPEGHPTTSFPPPHAAPLYA
GIYPHGTLVSAGPQDGLQQHPGLQYLKSQSAVSPLVPSFAIHSMMFHRQLLASSPSPHHF
YRQPGGAPLYGDLLHHLYPLSTLPPPQLSSVHPSTRL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactgaagtgggtgggctcgtcttgcggcttacacggaccatatatc
ttctataaagcctttaaatttcaccggggcggcaagccgagaatcctcgctctcggggac
tttttcttcgtccgatgcaaacccgaggatcccgtatgcatagcggagctccagctgctc
tgggaggagaggacgagcaagcaacttttatccagctccaaactttatttcctacccgag
gatactccccagggacgcgcggtggctcagcatggagagcacgaggtaatcgcagtatca
gagaaggtgatcgtgcggctgtcggacctggtgaagtggacggtaccagacttctcagga
tgggacaacggtctgaaggtggagcccctcaagccctccgtgctccgggagctggggacc
aacgggaggcgcgagggcctccaccgctaccgggagagcaccctgaccagcggactcaac
ttcaaggatgtacagagggagcggtcacagctaggccaggaggaggacggccggaaggtc
ttggtcctcagctacccgcagtattgccgctaccgctccgtcctggctcggctccgggag
cagccgtcctcgctgctcatagaccacacggtgctggcgctgggcggcattgctgcattg
ggagggagcacgcggatcctatactgccgtgacaccttcgagcaccccaccctgctgcag
aatgagagcatctgtgacgagtttgctcccaacctgaaggggcgacctcgaaagaaaaag
ctgtccatctctcagaggagggactcccagggtcaggctccgggtcaaggctcttcaggg
tccacgcagggttcaacagctgtagcagctcaggaccactcgagccccgagagcaaagcg
acgaccaaggttaagcccggctacaaaacggtgcccaacgggaggctagccacggcggcc
aagcagaggcccgccggcctcggcaagaagtcctcggctgacgacagggagcgggcaaag
gagagggaggagaagagcgagcagaaggaggagaaggacgacgaggaaacatcggaggag
agccgagcggaggagcaggctttcttagtcgctctctacaagtacatgaaagaaagagac
acgcccatcgagaggatccccttcctcggcttcaaacagatcaacctttggaccatgttt
caagctgctcagaaactcggaggatatgagttgatcacagtccgcagacaatggaaacat
gtgtatgatgaattgggtggcaaccccagcagcacaagtgccgccacctgtacacggaga
cactacgagaggcttctgcttccttacgagaggcacctcaaaggcgagcaggacaagccc
ctccccttggccaaacccaggaagcaggagagcagccaagagaaggcatctacagctgga
gccaaaacaaaagcggttggggccaagaaactgaaaggccccaagccagggagtaaaaag
gacaaaggggaaacgagtcaagaacaaacacagcaggactcaaaggggaaagaagagaat
aatgagctctccatagccgtgaaaaaggaggcgtctcttcaagacgaaccgattgtaata
gaggaggaggagttgcatcttaccctgaagaaagaagagtcgttggcggcggagcagcca
tcctcacttgactgcagagccccgcatggcggtttctccctccacacggggccttctcct
caaactaaatggaggcaaattagtgagggcctcaaagctaatctcgtaggtgaacagcaa
accgaagggcatttcattccaaaaaatctttatctgtctcatcgctgggatcagaataag
cctgctggacatgttgctctgcctgagcacttctctaaggtcaaagactccattgaaaat
cacggcgggagagtgggaaaggtgctgccgatgtgcaagcaggcagatgaacagtgtata
gacctgagcacagattctttctcagagaaagaggactacagtgtgctcaagaaggagtct
acccaaggctctggacagactgcctactgcaaagctagccagggggtcatgtctcctttg
gccaaaaagaagctcctctcccaagtgtgcgattccaacccttactccttttctcttcag
tctccgcctcccacagccacatcgtctctcccacttatattagtttctgaacgtgacaaa
gagaagataaagagtgacgaggaggtggtgagacagagacacaagggtttgtcggacaac
atccctgaggtagcacctatattcaggccatcggtcatccagcacgcccagagcaccaag
gctcaccagcaaagcacaggtgggccgtcggagagggggactgctggggagccttcagac
acttacagctgccgggcaagccatcaccttcaacctcaagccagcgtgccatggcagcca
tacctcccccgaacgcaaacccaagatggtgcggaaaccaccgaggagaagctactccaa
agctcggccgctcagtccaggagctacgcaggcgactgctactcgtcacctcacctccac
agtttgtacagacaaaccgagagctgcctgagcaaggagaggatgcctggcttcggcagc
ggagagcggagggagcactacagcagggaccgggagggcagccaaagctttgcctgtggc
agcctggagcaggagggcatggcctacagatctcattacagtgacaggactcaaacacac
ggcgagaacggagaggctgaagacgagcccagagacttcaccatttcaaagcctctctcg
cagagggtttcctccttttccaagacccctttctgtggtctctcctatcccatcatgcat
catggtttggattcccatcccaaagcgtgccgagttcaacctatgacaatctcacccccc
aaacagagctcacctgagtcgtcgcagtcattttccagccccaaacctgcaggtgagctg
cccctcagtagtactattcgacccagcaagcggagtctggtggagcccgagagcgacgat
cctccagagcggaaggtgcgcgtggtgacacctatccaccctgccagcacgatccgacgc
agcgacccggaggagctgaaacccgccgagccggccctcgccattcacctcaacaatcat
ctacccgagggccacccgacaacctccttccccccgcctcacgccgcacccctctacgcc
ggcatttacccacacggtaccctggtgtcagcaggcccccaggacgggctccagcagcac
ccaggtctgcagtacctgaaaagccagtcggccgtgtctccgcttgtgccctcatttgca
atccactccatgatgttccacaggcagctgttggcctccagccccagcccacaccacttc
tacagacagccgggtggggcgcccctgtacggagacttgttgcaccacctctaccctctg
tcaaccctcccaccacctcagctgtcatcggtacaccccagcaccagactgtga
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