Kryptolebias marmoratus (mangrove rivulus): 108244988
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Entry
108244988 CDS
T05608
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108244988 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108244988 (arid2)
03021 Transcription machinery [BR:
kmr03021
]
108244988 (arid2)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108244988 (arid2)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
ARID
108244988 (arid2)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108244988 (arid2)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
108244988 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
108244988
NCBI-ProteinID:
XP_017287079
UniProt:
A0A3Q3BQQ3
LinkDB
All DBs
Position
LG1:34636233..34665970
Genome browser
AA seq
1593 aa
AA seq
DB search
MANSTGKNLPDQRRKGQAFLDELRQFHQSRGSPFKKIPIVGGRELDLNALYMRVVSLGGF
AKVSDKNQWAELGEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDEEAQPGNPKA
SLPVGAIPSSYNYQQHVVSDYLRQSYGLSTDFIQPCDYNKLVLSLLSSLPNEVDFAVNVC
TLLSNESKHAMQLDKDPKLVTLLLAHAGVFDDSLGSFSGVFGTDWKEKTSRDFVRFWKEV
VEDAEVRELIWDKSSPAQDGTSCEERWPSLFHPPRNSGIGDVEAQRVLQIAVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLMSRDRFLKMRAMEILGNLSKAEDNGVLICEYVDQESYREVMMLLTLPDLLLLMASL
EVLYLLAQLGEVPCSKIASVDRSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANADQAAE
VRPQLVEQVPAAVQGTPAPVTRVPAQPGVPPPGIVELDGEKFTLQWLNAHFETNAEGSVS
RSEMYSEYLATCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQEEAKASSQVQILLVGIRR
RAIPLPVQLYYQQQQQNPAAAAPPPPAARHDVPGDPQAPPPGLPPGPQFVRAPGPAHNSA
PSVALTSQEPLHASHQTVPRHPVPPQVPPQSPPNQQLQVRPSPAVQVPSNHSPQNPSSQQ
QHSPMLPTGTPVTLFQPVPPGHILTTRVQGVCPPITQHPPLPQTLPLSGNPSGAPQVEPQ
GGAGQVFSNAGAPNSQGSRVTFQNIAPKPAPNPSGGPAAAVAPPNQQPPTQSVVIVSPNP
QPSAAYTPAIHQIVLANPAAITGAQAVQVAGQPSAASGPCPPPPPPSTPQVQSSQTVSHA
LSAKRHQQPPPLQILSQTTTPQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPPPNN
TIAPSPQVLYQAGYGSQNPPPQPQQLSVQLVPGQLPAAGAPPLQTVQLLPGQLISTSSPG
ATAIIQGPSAAGQVTFTVVPSAGFTTSTAAVVAPGVPHHAPAPPPPPPAPLRGDKIICQK
EEEAKDVTELHIHERKIEVMENSSLDEGDAAANGKTSNGDVAAGAKLLNGQKCMESSLPP
YHSGNSQGALNGPAPESPAANGKQALSPGPNTPEPKKTLVNGVCDFERGEAGGNFNKNIP
NHVASKQCLGNGEVSPEPPPPPPLTPQQAERLANGPQPAAHRPSSELTNGPLGPGHASPV
LRQQLLPSSPANGVLPEARGLKRPAESEDRGAAAPSGIPSKVGVRIITISDPNNAGSSAT
MVAVPAGTDPSTVAKVAIENATQQRNYSPTQAAGTTPAVTPSPPPASQPAPTGSPSPRPP
AQQSPAAAPLEPIRKAGQNFKCLWQSCKRWFETPSQVFYHAATQHGGKDVYGGHCLWEGC
ESFPRQRLSFITHLQDKHCSREALLAGLKLEEQQAQPPNQTSSQTPPAAGGTLAQQRAPK
AIVNHPSAALMALRRGSRNLVFRDFTDEKEGPVTKHIRLTAALTLKNIAKHSDCGRMLVK
RHETHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaagaatctaccagaccagcggaggaaaggacaggctttcctg
gacgagctgcggcaattccaccaaagcagaggatcgccgttcaagaagattcctatcgtg
ggtgggagagagctggacctgaacgctctctacatgagagtcgtctctttaggtggattt
gctaaggtttcagacaaaaaccagtgggctgagctgggagaggagttcaactttcccagg
agttgttccaacgccgcattcgctttaaagcagtactacctgcgatacctggagaagtac
gagaaggtccaccacttcggggaggacgatgaagaagcgcagccggggaaccccaaagcc
tctcttccagtcggcgcgattccgagctcttacaactaccagcaacatgtcgtctcagac
tatctccgccaaagttatgggctgtcgacggatttcatccagccgtgcgactacaacaaa
ctggtgctgtcgctcctctccagcctccccaacgaagtcgacttcgccgtcaatgtttgc
accctgctgtccaacgagagcaaacacgccatgcagctggacaaagaccccaagctggtc
acgctgctgctggcccacgccggcgtcttcgacgactcattaggtagcttctccggggtg
tttgggaccgactggaaggagaaaacctcccgggactttgtcaggttctggaaagaggtg
gtggaggacgccgaagtcagagagctgatctgggacaagagcagtccagcacaagacggt
acgtcgtgcgaggagcgctggccgagcctcttccacccgccgcggaactcgggcatcggc
gacgtggaggcccagcgggtgctgcagatcgccgtcatcctgcggaacctctccttcgag
gaggccaacgtcaagctgctggcggccaaccgaacgtgcctgcgcttcctgctgctctgc
gcccactgcaacctcatctcgctgcgacagctcgggctcgacacgctgggcaacgtggcc
gccgagcttcagctggatcccgtagactttcggacgacgcacctgatctttcacaccatc
accaaatgcttgatgtccagggaccgcttcctcaaaatgagagccatggagatcctgggc
aacctcagcaaagcggaggataacggtgtgctgatctgcgagtacgtggaccaggagtcg
tacagggaggtgatgatgctcctcacgctgccggacctcctgctcctcatggcctccctg
gaggtgctctacctgctggcccagctcggcgaggtgccctgcagcaagatcgcctcggtc
gaccgcagcatagacctcttagtgcggttggtatcggtagaccttcacacgttcggaccg
gacgccctcacggcggtgcggttgatcgagcatcaggcgaacgccgaccaggcggccgag
gtccgaccgcagctggtggagcaggtccctgcagccgtgcaaggaactccggcgcccgta
acgcgggtcccagcccagcccggcgttcctcctcctggcatcgttgaactagacggggag
aagtttacgctgcagtggctgaatgcacacttcgagacgaacgccgagggctccgtgtcc
cgatcggaaatgtactccgagtacctcgccacgtgcagcaaaatgggacgaagcaacatc
ctgaactccaccggcttcctcaaatgtctgcggaccgtgttccccaaccacacgatgagg
cgacaagaggaggccaaagccagcagccaggttcagatcctcctggtgggaataaggcgg
agggcgatcccgctgcccgtccagctgtactaccagcagcagcagcagaacccggcggcg
gcggcgcctccacctccggcagctcggcacgacgtgcccggagaccctcaggccccgccc
ccaggcttacctccaggaccacagtttgtccgggccccaggccccgcccacaactccgcc
ccatctgtggccttgacgtcccaggaacctcttcacgcgagccaccagactgttccccgt
cacccggtgccaccgcaggtgcctccgcagtcaccaccaaatcagcagctgcaggtccga
cccagcccggcggtccaagtcccgtcgaaccacagtccccagaacccctcgtctcagcag
cagcactcccccatgctccccaccgggacccccgtcacgctgtttcagcccgtaccgcca
ggccacatcctcaccaccagggtacaaggcgtgtgccccccaattacccagcatccaccg
ctgcctcagacccttcctctctctgggaatccgagcggcgccccgcaggtcgaaccccag
ggcggcgccggtcaggtgttcagtaacgcaggtgcgcccaattcccaagggtcccgggtc
acgtttcaaaacatcgcccccaaaccagcaccgaacccgtcaggtgggccggcggccgcg
gtagctcctcccaaccagcagcctccgacgcagagcgtggtcatcgtcagtcccaacccc
cagccgagcgccgcctacacccccgccatacatcagatcgtcctcgccaaccccgccgcc
atcaccggtgcccaggcggtccaggtagccgggcagcccagcgctgcttcgggtccctgc
ccgcctcctccccctccctcaaccccccaggtccagtcgagtcaaactgttagccatgca
ctgtcggcaaaacggcaccagcagccgccgcctctccagatactctcccagactactact
cctcagcctacctccaccgagtccagcttgatcaaacagctactgcttccaaagcgaggg
ccgtcgacgcccggggggaagttgatcctacccgcgccgcaggtgccccctcccaacaac
acgatagcccccagtccgcaggtcctctaccaggccggctacggcagccagaatcctcct
cctcagccgcagcagctcagcgtgcagctggtgccgggccagcttcccgccgccggcgct
ccgccgctgcagacggtccagctcctgccgggacagctcatttccacaagcagcccgggg
gcgaccgccatcattcagggtccctcggcagcaggccaggtgacgttcaccgtggtcccc
agcgccggcttcaccacctccaccgctgccgtcgtcgcgcccggcgtcccccaccacgcc
ccggcgcctccgccgcctccgccagcgccactcagaggagacaagatcatctgccagaaa
gaagaggaggccaaggacgtcacggagctgcacatccacgagaggaagatagaagtgatg
gagaactcgtccttggacgagggcgacgctgccgccaacggcaaaacgagtaacggtgac
gtcgcggcgggcgccaagctgctaaacggtcagaagtgcatggagtccagtctacctcca
taccactcagggaacagccagggagcactcaacggcccggctccggagagtcctgctgcc
aacgggaagcaggcgctgtcccccggcccgaacacgcccgagcccaaaaagacgctggtc
aacggcgtgtgcgacttcgagcggggggaggccggcggaaactttaacaaaaacattcca
aatcacgtcgcttccaaacagtgcttggggaacggggaggtgagcccagagccgcctcct
cctcctcctcttactcctcagcaggccgagcgcctggccaacgggccccagcccgcagct
cacaggccttcctcagaattaaccaacggacctctggggccgggccacgcctcgcccgtg
ctgcggcagcaactgctccccagctcccccgccaacggggtactccccgaggcccggggc
ctcaagaggccggccgagagcgaggaccgcggcgcggcggcgccctcggggatccccagc
aaagtgggagtgcggatcatcaccatcagcgaccccaacaacgccggcagcagcgccacc
atggtggcagtgccggcgggaactgacccgagcacagtagccaaagtagcaatagagaac
gccactcagcagaggaactactcgcccacgcaagcagccggcacgacgcccgccgtaact
ccgtccccgcctcccgcctcccagccagcgccgacggggagccccagtccccgcccccca
gcacagcagagcccggcggcagcgccgttggagccgatcaggaaagccgggcagaacttc
aagtgtctgtggcagtcctgcaaacggtggttcgaaacgccctcccaggtgttttaccac
gcagcgacgcagcacggcggaaaggacgtgtacggcgggcactgcctgtgggagggctgc
gagtccttcccccggcagagactgtccttcatcacgcacttgcaggataaacactgttct
cgagaggcgctactggctggactcaaactagaggagcagcaggcacaaccccccaatcag
acttcttcccagactccaccagcggcgggcggcactctggcacagcagcgagcaccgaaa
gcaatcgtcaatcatccgagcgcggccctcatggcgctccgcagaggttcccgaaacttg
gtcttcagggacttcaccgacgagaaggagggcccagtgaccaaacacatccgattaacc
gctgccttaacgttaaagaacatcgccaagcactcggactgcggtcgcatgttggtaaag
aggcacgagacgcacctctccgtgctggcgctcagcaacatggaggtctccaccacgctc
gccaaatgcctttacgaactcacgcgctcgcttcaggcctaa
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