Kryptolebias marmoratus (mangrove rivulus): 108245156
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Entry
108245156 CDS
T05608
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X3
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108245156 (trub1)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
108245156 (trub1)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108245156 (trub1)
Prokaryotic type
108245156 (trub1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
GAIN_A
Pus10_C
Motif
Other DBs
NCBI-GeneID:
108245156
NCBI-ProteinID:
XP_017287318
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All DBs
Position
LG2:36790078..36802878
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AA seq
261 aa
AA seq
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MAGNMSNTAAPITSSLSKLQALHGLFAIYKKPEAGVPTTNPRKRKTQQLKMGHGGTLDSA
ASGVLVVGVGNGTKMLSKMLTGSKKYVAVGELGKATDTLDATGTVILEKGFEHITKPDME
DKLKYFTGDIMQVPPLYSALKKDGQRLSVLLKQGHKVEAKPARPVTVYSLTLQEFKSPLF
TLDIECGGGFYVRSLVDDLGKALSSCAHVKELIRTKQGPFTLQDHALQEEQWNLENILRS
LQSCSEGDQNLVPPKLPETNT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaatatgagcaacactgctgctccaataacaagttctctgtccaaactgcag
gctttacatggactgtttgcgatatataaaaaaccagaagcaggtgttccgacaacaaac
cctcggaagaggaagacccagcagctgaaaatgggacacggagggaccttagacagcgct
gccagcggggtgttagttgttggtgttggaaatggaactaaaatgctcagcaaaatgttg
accggttcaaagaaatatgttgctgtaggagaactggggaaagcaacagacactcttgat
gccactgggacagtgattctcgagaaaggctttgaacacataaccaagccagacatggag
gacaagctgaaatatttcactggtgacatcatgcaagtccctccactctactctgcgctg
aagaaagatggccagcgtctgtctgtcttgttaaagcaaggccacaaggttgaggccaaa
cctgcgagacctgttactgtgtacagcctgaccctgcaggagttcaaatctcctctcttc
actctggatattgagtgcggaggtggattttatgtcaggagtttggtggatgacctggga
aaagctttgtcatcatgtgctcatgtgaaggagctgatcagaacaaagcagggtccattc
accctccaggatcacgccttacaagaggagcagtggaacctggagaacatccttcggtct
ttgcagtcctgctcagaaggagaccagaacctggtccctccaaaactaccagagaccaac
acctaa
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