Kryptolebias marmoratus (mangrove rivulus): 108245194
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Entry
108245194 CDS
T05608
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03271
Virion - Rotavirus
kmr04145
Phagosome
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04514
Cell adhesion molecules
kmr04530
Tight junction
kmr04810
Regulation of actin cytoskeleton
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
108245194 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108245194 (itgb1a)
04514 Cell adhesion molecules
108245194 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108245194 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108245194 (itgb1a)
04530 Tight junction
108245194 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108245194 (itgb1a)
04810 Regulation of actin cytoskeleton
108245194 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108245194 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108245194 (itgb1a)
04515 Cell adhesion molecules [BR:
kmr04515
]
108245194 (itgb1a)
04090 CD molecules [BR:
kmr04090
]
108245194 (itgb1a)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
108245194 (itgb1a)
Exosome [BR:
kmr04147
]
Exosomal proteins
Proteins found in most exosomes
108245194 (itgb1a)
Cell adhesion molecules [BR:
kmr04515
]
Integrins
Integrin beta subunits
108245194 (itgb1a)
CD molecules [BR:
kmr04090
]
Proteins
108245194 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
108245194
NCBI-ProteinID:
XP_017287388
UniProt:
A0A3Q3AFK7
LinkDB
All DBs
Position
LG21:2470540..2505353
Genome browser
AA seq
798 aa
AA seq
DB search
MELKLIFITLLGLFCCCNTQKEGNECIAANAKYCGECIQAGAKCGWCADKNFLKQGETVS
SRCDELQSLIKRGCNEMHNPRGEIKTVFNKTVTNRTRGEKQLNVDEIIQVQPQKLLLTLR
SGEPQSFLLKFRRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLKEKMDGITSDFRIGF
GSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTNDGSLFNNLVGQQHISGN
LDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLE
NNIYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPIYQELKNLIPKSAVGILSANS
SNVINLIIDAYNSLSSEVILENSKLPEGVTVTYTAYCKNGVVNEGETGRKCSNISIADEV
IFNISFTSKGCPKKGKQETIKIKPLGFTEELEVILRFICECDCSKDGVKNSNDCHFGNGT
FECGACRCNEGRVGRNCECSSNDVATEDMDRNCRNGTDICSNNGECVCGMCECKKRENPE
ERYSGEFCECDNFNCDRSGNKLCGGHGRCECRVCICDPMWTGSACDCSLSNKTCLDSNKQ
LCNGRGTCECGSCKCINPIFQGPTCELCPTCPEVCTENKECVECRAFGTGEKKETCEKEC
SDFKLTKVKTRDKLPQTNDASYPVKNCKERDANDCWFYYTYSVNNNTEKVVHVVEEPECP
TGPDIVPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYK
SPINQFQNPNYGRKGAGL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagctgatatttataacattgttggggctcttctgttgctgcaatactcag
aaagagggaaacgagtgcatcgctgccaatgccaaatactgtggagagtgcatccaggct
ggagccaaatgtggctggtgtgcagacaaaaacttcctaaaacaaggcgagacggtgtca
agtcgttgtgacgagctgcagtctctgataaaaagaggctgtaacgagatgcataaccca
cgcggggaaatcaagactgtcttcaacaagacagttacaaatcgcaccagaggagaaaaa
caactgaatgtagacgaaatcattcaggtccagccccagaaactgctccttactctccga
tcaggtgagccccagtcttttctcctgaagttcagaagggcagaagattatcccatcgac
ctgtactatttgatggacctgtcctactccatgaaggatgacctggagaatgttaagaac
ctgggaactagtctgaaggagaagatggatggcatcacctctgacttcaggataggtttt
ggatcttttgtggagaagacagtcatgccttacatcagcaccactccggccaagttgctg
aacccgtgcacaggcgatcagaactgcaccagccccttcagctataagaatgtcttgaag
ctgaccaacgatggctcattgttcaacaatttggtgggccagcagcacatctctggaaac
ctggactcccctgaggggggctttgatgccatcatgcaagtggctgtgtgcggggagcag
attggctggaggaacgtcactcgtctgcttgtgttttccactgatgctggcttccacttt
gctggagatggcaaactgggtggcattgtactgcccaatgatggaaaatgtcacttggag
aacaatatttacacaatgagtcactattatgactatccatccattgctcacctcgttcag
aagctgagtgacaacaacattcagactatctttgcagttacagaagagtttcagcccatt
taccaggagctgaaaaatctgataccaaagtcagctgttggtattctgtcagccaactca
agcaatgtcatcaacctcattatagatgcttacaattctctctcatcagaggtgattctg
gagaacagcaagcttccagagggagtgactgtaacgtacacagcctactgtaagaacgga
gtagttaatgagggtgaaactggaaggaagtgctccaatatctctattgcagatgaggtc
atatttaacatctccttcacatctaagggttgtccaaaaaaaggcaagcaggagaccatt
aagataaagcctttgggtttcacagaggagttggaggtgatcctcagattcatctgtgag
tgtgattgcagcaaggatggagtcaagaacagtaatgattgccactttggtaatgggacc
tttgaatgtggagcctgcaggtgtaacgagggccgcgtgggcagaaactgtgaatgcagc
agcaacgacgtggccacagaggacatggaccggaactgtcgcaacggtaccgacatctgc
agcaacaacggggaatgtgtttgtggcatgtgtgagtgcaagaagagagaaaacccagag
gagcggtacagcggcgagttctgtgagtgtgacaacttcaactgtgaccgctctggaaac
aagctttgtggaggtcatggacgctgtgagtgcagagtgtgcatctgtgaccccatgtgg
actggaagtgcctgtgactgttctctcagcaacaagacatgtttggacagcaacaagcaa
ctctgtaacggcagaggaacgtgtgaatgtggctcctgcaagtgcatcaaccccatattc
cagggtcccacttgtgaattgtgccctacctgtccagaagtctgcacagagaacaaagag
tgcgttgagtgtcgggcatttggcactggtgaaaagaaagagacatgtgaaaaagaatgc
agtgacttcaagctgaccaaagtgaagaccagagacaagctgccccagaccaacgacgcc
tcctaccctgtcaaaaactgcaaagagcgggacgccaacgactgctggttctactacacg
tacagtgtcaacaacaacacggaaaaggtggtccatgtggtggaagagcccgagtgcccc
accggtccggatatagtccccattgtggcaggcgtggtggccggcatcgtgctgattggc
ttggccctgctgctcatctggaagctcctgatgatcatccacgacaggagggagttcgcc
aagtttgagaaggagaagatgaatgccaaatgggatacgcaagaaaacccaatttacaag
agtccaatcaatcagttccagaacccaaactatggacgtaaaggcgctggcctttga
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integrated database retrieval system
