Kryptolebias marmoratus (mangrove rivulus): 108245397
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Entry
108245397 CDS
T05608
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03272
Virion - Hepatitis viruses
kmr04145
Phagosome
kmr04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108245397 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108245397 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
108245397 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108245397 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108245397 (scarb1)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Phagocytosis
Scavenger receptors
108245397 (scarb1)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108245397 (scarb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
108245397
NCBI-ProteinID:
XP_017287777
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Position
LG14:complement(7908213..7942995)
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AA seq
517 aa
AA seq
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MAMNKSKVSAGFVVLGVLTAFFGIVLVVVGPIVIDDQVVKNTVIDPQNELSYTMWKDLPV
PFFMSVYFFDVLNPQEILKGEKPMVEERGPYVYRKQCRKENITFHPNGTVSYKEYRRYFF
ERSMSVGNESDVVTIPNMLVLGAAVMLENMPYALRLLISATFKGFKEGPFLTKTVGELMW
GYDSKLVEFLNKYVPGMLPSTGKFGLFVEFNNSNTGLFTVHTGKDDIKNVHKVDSWNGLR
ELTYWRTPQCNMINGTAGQLWPPFMTKESTLRFYSPDACRSLELVYKQSGSMKGIPSYRF
VAPKTMFANGTDYAPNEGFCPCRQSGLLNVSACHHNSPTFISQPHFINGDPALQDFVLGL
HPNEDKHDLFIDIHPLTGVPLNVSIRLQLNLYMKRVPGFTETGKISEVVMPMLWFAESGY
IDGPVLTTFHTNLVILPAVMEYMQYIFIALGLVTIVVASLVHYKVKTSPKLYVISTVTEK
LGKKDCKNDTVPSRSTSTSTEEQTPLLQDNTNQKTHR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaataaatccaaagtctccgctggtttcgtggtgctcggggtgctgacagcg
tttttcggcattgttctagttgtcgtgggaccaattgtcatcgacgaccaagtagtgaag
aacaccgtgatcgatccacagaatgagctctcctacaccatgtggaaggacctccccgtg
cccttctttatgtccgtctacttcttcgacgtcctgaacccacaggagatcctgaaagga
gagaagcccatggtggaggagagagggccctacgtgtacagaaagcagtgtcggaaagaa
aacatcacgtttcaccccaacgggacagtgtcctacaaagaatacagaagatacttcttc
gaacgctccatgtctgttgggaacgagtcggacgtcgtcaccattcccaacatgcttgtt
ctgggtgcagcagtgatgttggagaacatgccctacgcactgcgtttattgatcagcgcc
accttcaagggtttcaaggagggtcccttcctgaccaaaacagtgggagagttgatgtgg
ggttatgatagtaaactagttgaattccttaacaagtacgtgcctggcatgttgccctca
actggaaagtttggcctctttgtggaattcaacaactccaacactgggctgttcactgtc
cacactgggaaagatgacatcaaaaatgtccacaaagttgactcctggaacggcctccga
gagctgacctactggaggactcctcagtgtaacatgatcaatggaacagcggggcagttg
tggcctccattcatgactaaagagagcaccctgcgcttctacagccccgatgcttgcagg
tctttagaacttgtttacaagcagtctggcagcatgaaggggatcccttcatatcgattt
gttgctcccaagaccatgtttgctaacgggaccgattacgcccccaacgaaggcttttgt
ccctgcaggcagtccggcctgctcaacgtcagcgcctgccaccacaattccccgaccttc
atctctcaacctcacttcattaatggtgatccggcactgcaagactttgtgttgggcctt
catcccaatgaggataaacatgaccttttcatagacatccacccactaacgggtgtccct
ctgaatgtgtccatccgccttcagctcaacctctatatgaagagagttccaggatttaca
gaaactggcaagatttctgaggtggtgatgcccatgctgtggtttgcggagagtgggtat
atagatggaccagtcctcactacattccacacaaacctggttattctacctgctgtgatg
gagtacatgcagtacatcttcatagctcttggtctggtaacaattgttgttgcctctctg
gttcattacaaagtgaagacgtctccaaagttgtatgtaatctccacagtgacagaaaaa
cttgggaaaaaggattgtaagaacgacacagtaccaagcagaagcacaagcacttcaacg
gaagaacaaacccctctgcttcaagacaacacaaaccagaaaacacacagataa
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