Kryptolebias marmoratus (mangrove rivulus): 108245542
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Entry
108245542 CDS
T05608
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04137
Mitophagy - animal
kmr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108245542 (optn)
04137 Mitophagy - animal
108245542 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108245542 (optn)
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108245542 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108245542 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108245542 (optn)
Xenophagy
Cargo receptors
108245542 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF4795
DUF4248
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
108245542
NCBI-ProteinID:
XP_017288042
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All DBs
Position
LG18:5588916..5595904
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AA seq
527 aa
AA seq
DB search
MASEGPMMNGNISGPPGQSVALEETVKQMNNLIQENRDLKEALRQTNLTMKERFEGLTAW
REKQRQERDFMESRLEEARSHMQALTLENQELSKKLEGAGGEARARGGGQSTELEALRAQ
VARLQAEKNDLVALNSELQLKAEQDSQDDSFIEVIRVSDGGVEGVNEACGAERSRRPDLS
MTASRLDSEGVTVSQLLQSLRNETQRCERLEAELQASAARVKELEASKCGEEESTQTEIQ
EDSEKAASEVENLKSQVMTLFKELQQAQSKLDEAEGMKRNLQDRCREVEQDVVTLKAQLE
EKQAMQLENDRLKLQLGSVQTQTQIEQRKADEERNNLAQLKDAYTKLFEDYNELKEERKK
RESLLVEKELVDELQRRLSAAEEALAVKQSRIDEMKQDMFLKEKELETISVFQAQAEVYS
SDFYAERAAREKIHEEKERLAAQLEFVKKQNSQLQEEVDSLGRRSLNEMQRRHGSSGGNA
HGAGPSLVGRGADWQHQGNIPEHACPKCGEILPDLDSLQIHIMDCIN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgaaggccccatgatgaacggcaacatctctggcccccccggtcagtccgtg
gcgctggaggagaccgtgaagcagatgaacaacctcatccaggagaacagagacctgaag
gaggccctgcgtcagaccaacctgaccatgaaagagcgcttcgagggtctgaccgcatgg
cgggagaagcaacgacaggagcgggacttcatggagagccggctggaggaagctcggagc
cacatgcaggcgctgaccctggagaaccaggagctgagcaagaagctggagggggccggg
ggagaggcacgagcccggggtggaggccagagcacagagctggaggccctgcgggctcag
gtggcccggctgcaggcggagaagaatgacctggtggctctgaactcggagctgcagctg
aaggccgagcaggactctcaggacgactcgttcatcgaggtcatcagagtgtcggacgga
ggcgtggagggtgtgaacgaggcatgcggcgcggagcgcagccggcgcccggatctcagc
atgacggcgtcccggctggacagcgaaggggtgacggtcagccagctgctgcagtctctg
aggaacgagacgcaaaggtgtgagcggctggaggcggagctgcaggcgtctgctgccaga
gtcaaagagctggaagccagcaagtgtggagaagaggaatcaacccaaacagagatccag
gaggattctgagaaggcagcgtctgaggtggagaaccttaagtctcaggtgatgacgctc
ttcaaggagctgcagcaggcccagagcaagctggatgaagccgaaggcatgaagaggaac
ctgcaggacagatgtcgggaggtggagcaggacgtggtgacgctgaaggctcagctggag
gagaagcaggccatgcagctggagaacgaccggctgaagctgcagctgggcagcgtgcag
acccagacccagatcgagcagaggaaggctgatgaggagaggaacaacctggctcagctg
aaggacgcctacaccaagctgtttgaggactacaatgagctcaaggaggagaggaagaag
agggagtccctgttggtggagaaggagctggtggacgagctgcagcggcgtctgtctgcc
gccgaagaggcgctggctgtcaaacagagcaggattgacgagatgaagcaggacatgttc
ctgaaggagaaggagctggagaccatctctgtcttccaggctcaggcggaggtctactcc
tcggacttctacgcggagcgagcggcgagggagaagatccacgaggagaaggagcgcctg
gccgctcagctggagttcgtcaagaagcagaacagtcagctgcaggaggaggtggactct
ctgggccggcgttcgctgaatgaaatgcagcggagacacgggtcgtctggaggaaatgcg
cacggagccggaccatctctggttggacgaggcgccgactggcagcatcaggggaacatt
cctgaacacgcctgccccaagtgcggcgagatcctgccggacctggactccctgcagatc
cacatcatggactgcatcaactag
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