Kryptolebias marmoratus (mangrove rivulus): 108245559
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Entry
108245559 CDS
T05608
Symbol
rbm17
Name
(RefSeq) splicing factor 45
KO
K12840
splicing factor 45
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108245559 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108245559 (rbm17)
Spliceosome [BR:
kmr03041
]
Complex A
U2 snRNP components
U2 related factors
108245559 (rbm17)
Complex B
108245559 (rbm17)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
108245559
NCBI-ProteinID:
XP_017288073
UniProt:
A0A3Q3BHI5
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Position
LG18:complement(5436941..5451284)
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AA seq
420 aa
AA seq
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MSLYDDLGVGASDTKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMKQTTVLAPVIDLKRG
GGSDDRQNIDTPPHAAAGLKDAVPSGFSSGDVLIPLADEYDPMFPNDYEKVVKRHREEQQ
RKREQERQKEIEEREKRRKERHEGGAPSGFSRFPAAEEDSDEEEEYEKEWRKRSMGGAAI
APPSSLMDKDGSSSFSHEDEGRARGSKAAIPPPMYDDSDRPRSPPVPTSSFLANMGGTVA
HKIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDAAEKPGSSQSGAAETLAG
GSAADASKKADANPLTEILKNPTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVI
FEIADVPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYSLDKFRVLDLGEQV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtacgatgatctcggcgtcggcgccagtgacaccaagaccgaaggctggtcc
aagaacttcaagctgctgcagtcgcagctgaaggtgaagaaggcggctctgacccaggct
aagacgcagcggatgaagcagaccacagtcctggctcctgtcatcgatctgaagagagga
gggggcagcgatgatcgacagaacatcgacactcctccgcacgcagcagcaggactcaag
gacgccgtccccagcggtttctcctccggcgacgtgctcatccccttggctgacgagtac
gaccccatgttccccaacgactacgagaaggtggtgaagcgccaccgggaggaacagcag
cgcaagcgagagcaggagcgccagaaggagatcgaggagagggaaaagaggaggaaagaa
aggcacgaaggcggcgctccgagcggtttctctcgtttcccagcagcagaggaagactcg
gatgaggaggaggagtacgagaaagagtggaggaaacgaagtatgggtggagcagctatt
gcccctccatcatcacttatggacaaagatggctcttcctcattttcccacgaagatgaa
ggtcgtgcccgaggctcgaaggccgccatccctccaccgatgtacgacgactcggacagg
ccgcgctcgccgcccgtaccaaccagctcgttcttggcgaacatgggaggcaccgtggcc
cataagatcatgcagaagtacggcttcaaagaaggtcagggtctggggaagcacgagcag
ggcctgagcacggcgctctctgtggagaagaccagcaagagaggcgggaagatcatcgtg
ggcgacgcagcagaaaaaccagggtccagccagtcaggagctgctgagactttagccgga
ggttctgcagcggacgcttccaagaaggcggacgccaacccactcacagagattctgaaa
aacccgaccaaagtggtcctgctgaggaacatggtgggcagaggagaagtggatgaagac
ttggagggagaaacaaaggaagagtgtgagaaatacggaaaagtggttaaatgtgtcatt
tttgagatcgcggacgtgcccgatgacgaagccgtcaggatattcctcgagtttgagcgg
gtggagtcggccatcaaagccgtcgtggatctaaacggacggtacttcggaggacgagtc
gtcaaggcctgcttctacagtctagacaagtttcgggttctggatctgggagaacaggtg
tga
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