Kryptolebias marmoratus (mangrove rivulus): 108245665
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Entry
108245665 CDS
T05608
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
108245665
NCBI-ProteinID:
XP_017288253
UniProt:
A0A3Q2ZNP1
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Position
LG17:complement(4445277..4450526)
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AA seq
656 aa
AA seq
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MDLRVTSLLLVLLALAEGTPERYYAPKVTKVPYPVKSHAVAGQPGPPGPPGEHGPMGPPG
PPGERGVGHTGPRGPPGPPGPPGHSQAGKPGTPGAPGKPGPHGIPGEKGIPGGPGPMGQR
GAPGTPGTPGPAGLSAVGKPGPSGLPGAMGPRGEPGLKGHPGIPGFPGPKGEKGIGVPGV
QGSPGPTGPMGPSGMPGKPGIGSPGATGYPGEPGKSGMPGRDGAPGPMGSPGPKGHTGPP
GVGASGKPGQNGTPGMPGPMGPKGPQGPAGQPGSPGMPGVGKTGEPGIPGSRGAPGTPGT
TGQKGEPGPTGFTGHSGAPGPIGPAGPQGARGFQGESGPVGPKGDIGMVGAPGPRGSKGE
QGAQGFTGKPGTPGAVGPAGLPGHNGAQGPKGSQGHAGAPGLPGSNGAPGLKGHTGQPGA
PGKSGEPGRPGAMGPVGLPGPSGPPGLKGHPGIPGAPGPAGQMAKGVSGPQGPPGIRGER
GQDGLPGPVGPPGPPGPPGEVVYHHDKSMPIKSHEVVMPHEMMKAPMSAFSAVLTMAYPP
AGTPIQFNQVLYNGEHHYDAHSGVFTCQIPGLYFFSFHMHVNGANALVALYKNEEPVVFT
YDEYNKGFLDQMSGSAVLMLHPGDRVYIQVPDEESNGIFAADNVHCIFSGFLIAST
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggacttgagggtaacaagccttcttcttgttctcctggctttggctgagggaacccct
gagaggtactacgcgccaaaagtgacaaaggtcccctaccctgtcaagagccacgctgtc
gcaggacaaccaggtcctccaggtcctccaggtgagcacggaccaatgggaccacctgga
cctcctggagaaaggggtgttggacatacaggaccacgaggcccaccaggacctcctgga
ccccccggccactctcaggcgggtaaaccaggtaccccaggtgcacctggaaaaccaggt
ccccatggtattcctggtgaaaaaggtatccctggtggacctggaccaatggggcaaaga
ggtgcacctggaacccctggaacccctggacctgctggactttcagctgttggaaaacct
ggaccatctgggctccctggtgcaatgggtccaagaggtgagcctggtctgaaggggcat
cctggtattcctggttttcctggtcccaaaggtgaaaaaggcattggtgttcctggggta
caaggatcaccaggtccaactggaccaatgggcccatctggtatgccaggcaaacctgga
attggctctcctggtgccactggctatcctggagaacctggtaagtctggtatgccagga
agagatggagctcctggcccaatgggctcaccggggcctaagggtcacactggacctcca
ggtgtaggagcctctggaaaaccaggccaaaacggtacaccaggaatgcctggacctatg
gggcccaagggtccacagggtcctgctggtcagccaggctcccctggcatgccaggtgtt
ggcaaaacaggtgaaccaggaattccaggaagcagaggcgcccctggaactccaggaacc
actggccagaaaggagagccaggcccaactggatttactggtcactcgggtgctcctggt
ccaattggcccagctggtccacagggtgcaagaggattccagggtgagtcaggtccagta
ggacccaaaggcgacattggtatggtgggtgcaccaggcccaaggggatccaaaggtgag
cagggagctcaaggtttcactggaaaaccaggcacccctggggcagtaggtcctgcagga
cttccaggtcataatggtgctcagggtccaaaaggttcacaaggtcatgctggtgctcca
ggactccctggttcaaatggtgcacctggactaaaaggacatacaggccaacctggagca
ccaggaaaaagtggtgaacctggaaggccaggggcaatgggaccagttgggctccctggt
ccatcaggtccacctggactcaagggtcatccaggaattccaggggcaccgggtccagct
ggccagatggctaaaggagtttctggtcctcagggtccccctggaattcgaggtgaaagg
ggtcaggatggtcttcctggccctgttggtcctcccggtcctcctggtccaccaggagaa
gtggtctaccaccatgacaagagcatgccaatcaaatcccatgaagttgtgatgcctcac
gaaatgatgaaggctcctatgtctgccttcagtgctgtcctaaccatggcctacccccca
gctggaaccccaattcaattcaaccaggttctttataatggagagcatcattacgatgca
cacagtggtgtgttcacctgccagatcccaggcctgtactttttcagcttccatatgcac
gtcaacggtgctaatgcattggtggccctctacaaaaatgaggagccagttgttttcacc
tatgacgagtacaacaagggcttcctggaccagatgtcaggcagtgctgttctcatgttg
catcctggtgacagagtctacattcaagttcctgatgaggagagcaatggtatatttgct
gcagacaatgttcattgtattttctctgggttcttaattgcctcaacgtga
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