Kryptolebias marmoratus (mangrove rivulus): 108245723
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Entry
108245723 CDS
T05608
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
kmr00535
]
108245723 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
kmr00536
]
108245723 (acanb)
04091 Lectins [BR:
kmr04091
]
108245723 (acanb)
Proteoglycans [BR:
kmr00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
108245723 (acanb)
Glycosaminoglycan binding proteins [BR:
kmr00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
108245723 (acanb)
Lectins [BR:
kmr04091
]
C-Type lectins
Lecticans
108245723 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
Chordopox_A33R
V-set
UL45
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
108245723
NCBI-ProteinID:
XP_017288339
UniProt:
A0A3Q2ZYU4
LinkDB
All DBs
Position
LG11:complement(5597253..5616731)
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AA seq
1254 aa
AA seq
DB search
MTTLFLLCVSFPIIVATLIQHHDDMYGTLRVSIPVERPFSPLLGDKVVVPCYFQDNTVND
PGAPTIAPLSHRIKWTYLTTQNVSTILVASKGKVYVEPEYVDRVTLVSYPMIPTDATMEL
TELRSKDSGRYRCEVIHGIEDSYDTVNINVQGIVFHYRPITDRYSLTFEQAKAVCIRNKA
TIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPRERCYGDKETFPGVRTYGIRDPDE
TYDVYCFAEKMSGTVFYSMSVEKFTFYDAATQCVRLGARLATTGELYLAWKDGMDVCNAG
WLADGSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPNPNSHYDAICFQETDDKDAVPE
RTTPFPSIIPITSDVKPYPGLTPEPGQKEVRSEKEEVISSLPVPGVSGQDIVLVPGLDLT
GEDVTMAPTGVVFHYRPITGRYTLTFLEAHQACRSIGAVIASHQQLQAAFEQGLHQCDAG
WLRDQTVRYPIVSPRENCAGNLLSHPGVRSYGLRPASELYDVFCYVEHLNGEVFFTSDYD
SFSYDEAVQHCQKLNSTLATPGQLYAAWKRGLDKCRPGWLMDRSVRYPITTPKPYCGGGQ
TGVHIIYAFSNQTGFPDEYSRYDAYCFRAESSVEHTEQKVTISLEQKTIYQKTGSTYHFT
STVATTTEVYNEMEAAVNLMETKFIRKATVQSQHVAPTVLKEITPAPSVPADVSGSGSAE
HSASGEPSGEPSRSSGDASGSGHDIIFSGRTDIFSGGQSASESLESLEGGSVDLFTSGDS
GSASGSISGSTSGSTSGSGFGSGSGFIISGSGTSSGSGDISGSGDASGIVMLNGETVDVS
KTHQNRTEQEFGQGGVIISGDFMETSVSGSGHVSGSGSGEFSGISFVDHSGIDLTEQQSG
QQELSRYQPSGSGYPSGFPSGFPSSVSGSGSASGDPLHHNDVILITDDELFDVTVSSHDP
EQGRGVVQISGEGSGSGVSGYSGSLLTSGTGAPHKLINLQHVAATPDTAYTAPTTAPSVS
LETPAAVKQPEVDEGQMGCPDGWKVFHGSCYYLSEEKHTWSEAEQRCQEFNAHLVSISSL
EEQEFVSSSGMEYQWIGLSDQDVQNEFKWTDGSPLSFVNWRPNQPDNYFGSGEDCVVLIL
HEGGQWNDVPCNHHLSYTCKTGPVMCGAPPEVEHAKPMGSSRDHYTVNSIVRYECDAGYT
QRHLLVIHCMENGEWQQPKVKCIEVNANSQRLHKRSLWTRSKGVSSQQEQRKLL
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgacaactctatttctgctgtgcgtgtccttccccatcatcgtggcaacactgattcaa
catcatgacgacatgtatggcacattgcgtgtcagcatccctgtggagaggcctttcagt
cctctgctgggcgataaggtagtggtgccctgctacttccaggacaataccgttaatgac
cctggagccccgaccatcgcgccgctctcccaccgcatcaaatggacctatctgaccacg
cagaatgtttccacaatcttggtggcttcaaagggcaaagtttacgtggagccagagtat
gtagacagagtcaccttggtcagctatccaatgattcctactgatgccaccatggagctg
acagagctaaggtccaaagattcgggccggtaccgctgtgaggtgattcatggaattgag
gacagctatgacactgtgaacatcaatgttcagggtattgtgtttcactaccgtcccatc
accgatcgctacagcctgacgtttgaacaagccaaagccgtctgtatccgtaacaaggcc
accattgctactcccgcacagcttcaagctgcttatgatgatggctaccatcagtgtgat
gctgggtggctttctgaccagactgtcaggtaccccatccatgagccacgggagcgttgt
tatggagacaaggaaaccttccctggagtgagaacctatggcatcagagaccctgatgag
acctacgatgtgtattgttttgctgagaaaatgtcaggcacagtcttctactccatgtct
gtagagaagtttaccttttacgacgcagctacacagtgtgtcagacttggtgccaggctg
gccaccactggcgagctttacctcgcctggaaagatggtatggatgtgtgtaatgccggt
tggctggcagatgggagtgtgcgctacccaatcaacattgccaggcctcaatgtggaggg
gggcttttaggagtgagaactgtctacttgttccccaatcagacagggtaccccaaccca
aactctcactatgatgccatctgcttccaagagactgatgataaagatgctgttcccgag
aggaccacacctttcccatccatcattccaatcacatctgacgtcaagccctacccagga
ctgacccctgaacctgggcaaaaggaggttaggtcagaaaaggaagaagttatctcctca
ttgcctgttcctggtgtgtctggacaagatattgtattagttcctggactggatttgaca
ggtgaagatgtgaccatggcgcccactggtgtggtgttccactaccgacccatcactggt
cggtacactctgacctttctggaggctcaccaggcttgtcggagtattggagcagttatc
gccagccaccagcagcttcaggcagcctttgagcaaggcctacaccagtgtgatgccggt
tggctgcgtgaccaaactgtgcggtatcctattgtgtcacccagagaaaactgcgctggt
aacctgctaagccatccaggagtgagatcctacggcttgaggccagccagtgaactctat
gatgtattttgttacgtggaacatctaaacggtgaggtcttcttcactagcgactatgac
agcttctcctacgacgaggcagtgcagcactgtcagaaactcaacagcaccctggccact
cctgggcagctgtacgctgcctggaaacggggactggacaagtgccgcccaggctggctg
atggaccggagcgtccgctaccccatcaccacccccaagccttactgtggaggaggccaa
actggggtccacatcatctacgctttctccaaccagacggggtttcctgatgagtactcc
cgttatgacgcctactgctttagagctgaaagttctgttgaacatactgaacaaaaagtc
accataagtctggagcaaaaaacaatttaccagaaaacaggcagcacttatcacttcact
tccactgttgcaactacaacagaggtctacaatgaaatggaagctgctgtaaatttaatg
gaaacaaaatttatccggaaagcgactgtccaaagtcaacacgttgctccgacagttctc
aaagagataacccctgctccttcggtcccagctgatgtgtccggatctggttcagctgaa
cattcagccagcggggagccctccggggagccatccaggtccagtggtgatgcgtccggg
tcaggacatgacatcatcttcagtggacgcactgatatcttctccgggggacagtctgcc
tctgaaagtctagagagtctggaagggggaagtgttgatctcttcacatctggagattcg
ggtagtgcatctggatctatatctggatctacatctggatctacatctggatccggattt
ggatctggatctggcttcattatatcaggatcaggtaccagcagtggaagtggggacatc
agtggtagcggtgatgcctctgggattgtcatgttgaacggggagacggtagacgtgtca
aaaacccaccaaaaccgcacagagcaggaatttggccaggggggagtcattatcagcgga
gactttatggaaacaagtgtttccggatcaggacatgtgtctggttcaggctctggtgag
ttttcaggcatttcgtttgtcgaccacagcggcatcgacttgacagagcagcaatctgga
cagcaagaattatctagatatcagccctctggatcggggtaccccagtgggttccccagt
ggttttccctctagtgtttcaggcagcggttctgcctctggagaccccctccaccataat
gatgtcattctaataacagatgatgagttgttcgacgtgactgtatcctcacacgatcct
gagcagggccggggtgtggtacagataagcggggaaggcagtggctcaggggtcagcgga
tacagcggctctttgctcacatcaggaactggagcccctcataagttgattaacctgcaa
catgtagcagcaactccagatacagcatacaccgcaccaaccacagcaccatccgtgtca
ctggaaactcctgcagctgtgaagcagcctgaagtagatgaaggtcaaatgggctgtcct
gatggctggaaggtgtttcacggcagctgttactacctctctgaggaaaaacacacttgg
tctgaggccgagcaacgctgtcaggagttcaacgcccacctggtcagcatcagctccctg
gaagagcaggagtttgtcagctccagtggtatggaataccagtggattggacttagtgac
caagatgtgcagaatgagttcaaatggacagatggaagtcctctgtcctttgtgaactgg
aggcccaaccagccagataactacttcggttctggggaggactgtgtggtgttgatcttg
cacgagggcgggcagtggaacgacgtgccctgcaaccaccacctttcctacacctgcaag
actggacccgtgatgtgcggagcaccccctgaagtggaacacgccaaaccaatgggcagc
agcagagatcactacactgtcaactctatagtccgctacgagtgtgacgcaggctacaca
cagcgccacctgctggtcatacactgtatggagaacggggaatggcagcagccaaaagta
aagtgcatagaagtcaatgccaacagtcagaggctacacaaaaggtccctctggacaaga
agtaaaggtgtcagcagccaacaggagcagaggaaacttctctga
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integrated database retrieval system
