Kryptolebias marmoratus (mangrove rivulus): 108245826
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Entry
108245826 CDS
T05608
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108245826 (sh3tc2)
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
108245826 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_MalT
TPR_2
SH3_2
SH3_1
TPR_1
SH3_9
TPR_7
TPR_5
TPR_10
SNAP
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
108245826
NCBI-ProteinID:
XP_017288539
UniProt:
A0A3Q3FHC7
LinkDB
All DBs
Position
LG9:11460849..11484695
Genome browser
AA seq
1513 aa
AA seq
DB search
MGNLFSQEDISPAELDALWREPPYTLGGANEHFSGNDNMTQGEEEDGLVGEAGEGVAEND
SYWKKNKAFLRGSIVSVGDKHSSEIVLLFTGRRRSCDDPDQTLQEALRTQLRVVESNSKD
VAQLFKDLSARLVSVHAEKDSFVLTFKTVEEIWKFSTYLSLGHVARCLENFLCDQSFWLD
PELLSELEINVTVNEEHLATLYLGLLLQEGSFFAKALFTGSELDEDDEEKLRFKKNDLLI
VRDTGQDSMWEGTMISTGNHGLVPVEAMQPLPYPFYQWFLRKYPGHAGCSPIEKELFEHS
IVTGSCVAIVDYSPMEPDELQLNQGDIVEIQGLLLRGVDVFIGKLPSTEHVGFVHRAHVK
PLNAIPLDEQLVFLTEEEKASLAQVNPCSSDMSDSSLLDRLFSSEISSVYRIDRLDETDF
MYILGHPKHDHTGLSSARQSLMSERSEGTTIYQSSPRASFTSPRISFHQSCNPLPREGER
LSFNLDETFRGLDEFQEDPPLFLEENSWDGEESELSDPTLTLLNQEHFKEDFLPLYDLQC
SFLWMTFSGKNEDELLGHLESVRECAKRMGMHWAHRRACFVLGRLCARKLKFSQARVYYE
EAMKVRVDGFSDIPLLVALFTNLTAIYLKQRMNDKLPQILEKASALLLCLPSHTFTAKDE
VELLKLLLRRSVVLGDKYLEARVCYLISSLLLLLRKTDDALPFVERLQFLSATLSTTEGG
PIVPLDLNWLLSWLYHRKYMPYLALASLSLDSRQDHSINEAFLKIKLFVRNSVRLNPSWK
DGTSLLPAQIVVYLQQALAVAGKGDDMKMQRDLCLGLASVYQQYGALDKAVHCAQQAVEA
GSHINEEDGFEASVLLGWLLVLTGQAERAQSILEPLLTSLQSTDSPTQRGVIHNLLALCL
RHQGRVREAGWHLHSALVISRESGNQRNQALALANLGCLALDAGASLVAERFLVRSLCLF
LDLWESPTDEEHVQTYLWLGRSYKDRGKNQNIRACYEMGLLIALHAKNLHSQTVVAKLLS
RLYADMLLYGQSIVYYEHCVSVSRQLKDKRLEGECLEKLSSFYLSLNTEKSSRKSLDYTK
QSLRISIDLGRREEESETWLQVGRIYYLIQEDELADMYLQAAVKTALRMNDPHFAMSIYE
EAGDVYFKGHRNRKASLNFYRDGSLPFARSINDIHSEFRVLSKLTELLMNQGEQEEALQY
ATLAIQIANQTGVRENERSTYHRLATIYYNLQQFEMAENYYLKSLSLCPPILQHPRETQY
YSKLYCRLGNLTLYELKDAFDAVGYFQLALAAALEDQANPKTLYVVYMKLAEIHCNHMPD
AQLCQVYRDRAQSLKRVLALVGNSADEMENVDDADREPDQRREKCSDADIGYAERCQDNS
APSLHTSHTNSKERCADMNLGEDSSLKGQRYGPADTDSQSYTDSILTGSFDTAKEQISDS
SSTTDTYQNPTDGKDSEFDSDHSMPSQIPVSHTSEVTGHADTRDTDSEDQNTPTKDTDSD
VDPTQTEPKEDKL
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacttgtttagccaagaagatatctctcctgctgagctggacgctctttggagg
gaaccaccgtacactcttgggggagcaaatgaacacttctcaggaaacgacaacatgact
caaggtgaggaagaggacggtctggttggagaagcaggtgaaggagtggcagaaaatgac
agctactggaagaagaataaggccttccttcgaggaagtattgtctcagtaggcgataag
cattcttcagaaattgtgctcctgtttactgggcggaggcgctcctgtgatgatcctgat
cagaccctgcaggaggcactgcgcacacaactccgagtggtggagagcaatagcaaagat
gttgcacaactctttaaagacctgtctgcccgtcttgtctctgtgcatgccgagaaggat
agctttgtgctcacattcaagactgtggaggagatctggaagttttcaacatatctttca
ttaggtcatgtagctcgttgcttggagaacttcctgtgtgatcagtcattctggctggac
ccagagctgcttagtgagttggagatcaatgtgacggtaaacgaggaacatctggccacc
ctgtacctgggtcttcttctacaagaaggatccttcttcgccaaggcactgttcacagga
agtgagctggatgaagacgacgaagagaagctgcggttcaaaaagaatgacctgctgatt
gttcgagacacggggcaggacagcatgtgggagggcaccatgatctccacaggaaaccac
ggcctggtgcctgtcgaggccatgcagccgctgccctaccccttctatcagtggttcctg
aggaagtatccaggccatgcgggatgctcaccaatagaaaaggaactgtttgaacattcg
atcgtgacaggttcgtgtgtagctatagttgactacagtccgatggaaccagacgagctc
cagctgaaccagggagacattgtggaaatccagggtcttctgctccgaggagtggacgtt
tttatcggaaaactcccctccacagaacacgttggttttgtacacagagcccacgtcaaa
cctctcaatgctatacccctagacgaacaattggtttttctgactgaggaggagaaggcc
agcctggctcaggttaacccgtgtagctcagatatgagtgacagcagcctgctggacaga
cttttctcctctgaaatcagctctgtgtacagaatagatcgattggatgagactgacttc
atgtacatcctgggtcatccaaaacatgatcatacgggtctgtcgagcgctcgccagagc
ctcatgtcagaaagaagtgaagggacaaccatctaccagtcctctcctcgtgcctcgttc
acctccccacgcatttcttttcatcagtcttgcaatcctctgccacgagagggagagcgc
ttatctttcaatctggatgagacgttcagaggtttggatgagttccaggaggacccacct
cttttcctggaagagaacagctgggatggggaagagtctgagctcagtgaccccacactg
actctgctcaaccaggaacacttcaaggaggatttcctgcccctgtatgacctacagtgt
tccttcctgtggatgactttcagcggtaagaatgaggatgagctgttggggcatcttgag
agtgtcagggagtgtgccaagagaatgggcatgcactgggctcatcgacgggcatgtttc
gtactcggtagactgtgtgccaggaagctgaagttctcccaggcacgtgtatactatgag
gaagctatgaaggttcgagttgatggtttctctgacattccgctccttgtggctcttttc
accaacctcactgccatttacttgaagcaacgtatgaatgacaaactgccccagattctg
gagaaggccagcgctctgctcctctgccttcccagccacacattcacagccaaagatgaa
gtagaactgctaaagctgctcctgaggagatcagtcgtcttgggggacaaatacttggag
gctcgcgtctgctacctcatctccagccttcttctgctcctgaggaagactgacgatgcc
cttccctttgttgagcgactccagttcctatcagcgacgctgtcaacgaccgagggagga
cctatagtacctttggaccttaactggctcttgagctggctctatcatcgtaaatatatg
ccttatttagccttagcctcacttagcctagattcaagacaagatcattcaatcaacgag
gcctttctaaagatcaagttgtttgtcagaaactctgttcgtctgaatccaagctggaaa
gatggaacctccctccttcctgctcagattgtagtttacctgcagcaggccctggcagta
gctgggaagggggatgacatgaagatgcaaagggacctgtgtttgggcctggcctcggtt
taccaacagtatggtgcacttgacaaggcagtgcactgtgcccaacaagccgtggaggca
ggaagccacatcaatgaggaggatggctttgaggcttctgtgctactcgggtggttgttg
gtgttgacgggccaggctgagagagcccagagtattcttgaaccactgcttacatccctg
cagagcacagacagtcccactcagcgaggagtgatccataacctcttagctttgtgcctg
aggcatcagggtcgtgttcgagaggcaggctggcatcttcattctgccctggtgatctcc
agagagagtggaaaccaaaggaaccaggccctcgcactggccaatctgggctgtctggct
ttagatgctggggcatctttggttgcagaacgcttcctggtcagatccctgtgccttttc
ctggatctttgggagagcccgacagatgaagagcatgttcagacctacctttggcttgga
cgaagctacaaggatagaggaaagaatcagaacatcagggcatgttatgaaatgggattg
ttaattgcactacatgccaaaaatttgcacagtcaaacagtagtggccaagcttttgagt
cggctgtatgctgacatgctgctctacggtcagagtattgtttactatgagcactgcgtg
tccgtgtccagacagctgaaggacaagaggctggagggagagtgtctggaaaaactcagc
agcttctacctctctctcaacacagaaaagtcatctcgtaagtctcttgactacaccaag
cagagcctgaggatttctattgatctgggcaggagagaggaagagtcagagacctggctg
caggtgggacgcatctactacctgatccaggaggacgagctggctgacatgtacctgcag
gcagcagtgaagacagccctgagaatgaacgatcctcactttgctatgagcatctacgag
gaggcaggagatgtttacttcaaaggtcacagaaaccgaaaggcttcgctgaatttctac
agggatggaagtttgccatttgcacgaagcatcaatgacatccattcagagtttcgtgtg
ttgagtaaactgacagagctgctgatgaaccaaggagagcaggaagaggctctgcagtac
gctactttggccattcagattgcgaaccaaacaggagtgcgtgagaatgagaggtctacc
tatcatcggctggctacaatttattacaacctgcagcagtttgagatggcagaaaactac
tacctgaagtctctgtctctgtgtccaccgatcctgcagcatcccagggagactcaatac
tactctaaactctattgcagactgggaaaccttaccctgtatgaactcaaggatgctttc
gatgcagtgggctacttccagttggctctggcagctgctcttgaggaccaagctaacccc
aaaactctgtatgtagtgtacatgaagttggctgagatccattgcaaccacatgcctgat
gctcagttgtgccaagtttacagagacagagctcagagtctgaagagagttttggctctc
gtgggtaactctgctgatgaaatggagaatgtcgatgatgcagacagagagcctgaccaa
agaagggaaaagtgctcggatgctgatattggatatgctgagaggtgtcaagataattca
gctccttcacttcacacgagccacacaaactcaaaggagagatgtgcagacatgaatctt
ggagaggattccagcctgaagggtcagcgttacggtcctgctgacacagacagtcagtcc
tataccgacagcatcttaactgggtcctttgacacagctaaagagcagatctcagactcc
agcagcaccactgacacttaccagaacccgacagatggtaaagactccgagtttgattct
gaccacagcatgcccagtcaaattcctgtcagtcacacaagtgaggtcacaggacacgca
gataccagagacactgattctgaggatcaaaacacccccactaaagacacagactctgat
gtagacccaactcaaactgagcctaaagaggataaactatga
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integrated database retrieval system
