Kryptolebias marmoratus (mangrove rivulus): 108245921
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Entry
108245921 CDS
T05608
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108245921 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
108245921 (acin1b)
03015 mRNA surveillance pathway
108245921 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108245921 (acin1b)
03041 Spliceosome [BR:
kmr03041
]
108245921 (acin1b)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108245921 (acin1b)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
EJC/TREX
108245921 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
108245921
NCBI-ProteinID:
XP_017288665
LinkDB
All DBs
Position
LG7:complement(13314916..13340237)
Genome browser
AA seq
1196 aa
AA seq
DB search
MADEDITLDGKPLHSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQRSSSSHS
VLQPNSQIGEEMCQNSFIKQYLAKQQELLRQRLEREAQKEDEDEESPAGPEEDDDHSEDN
DSSSYVADKHRASLSKASVPDVGGGGDSVMSHGPGSTFHHQEALETPRVRVQQATFQQGH
REPPAPSPPRAVASLSVRVLGQPDCQGFPLAAPRPQEKEPAGHSRPGSAHVVLNLSRSAK
GSAGNHVQDDSDDDDDDDDDSDDEDEDWGPGKAGRQKRMTPTLPQAAPSMSSAAARSKRK
LQPPQHIPPPQVDPTPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDEQERVSLREAQVAPF
QPLSMQRQDSDSSSRSSSPEPPVKRRHGPLSLLVHKMETEEASSAPGLSEETAHSTPGRS
NEAPPLRGSEAERKMKEKKEREQQQEELERERKKTQEQEQERKRLEEEKEKERTRLEEER
KQRQKEEQEKERKRREEENDRKCKEEEKRREEQRLKEEEEKKQKTVSQDRKVAKAQDSGS
SSDSDSKSDSSSPSSSSSSSSSSSRDKTQTANQLKKADQKQDGEDGKKTNLGKGLEKQNL
SKREVSEPSTAEVEPDSESSMAQQLASGSEPESSESRLEESTTPKAFAARRISLSSTKAS
PARTDGGAAEPDAGSAGGRKRRWGSSTAVTVKKPSISITTDSLKSLIPDIKVNQEAVVEL
HPEELQSSGDEENLDTGRGDPDKGLKIRRTVTQVVPSDSQENGQANEEEEEVEKVEREKP
CRTSRDKRRTSLSDEPSEPQISVNLDEETKKVTPSDSLVRRSISQQKSGVSVTIDDPVRT
TRQPSPPRGKVSNIIHVTNLVRPFTLLQLKELLNRTGSVVEEGFWIDKIKSHCYVTYATS
EEAVATRTALHGVKWPASNPKVLSVDFSEQDELDFHKGILKPNKEEDHVAPPVVPQNRLP
PLMPERDRDKDHERERDRDKERERDRERERDRGVRDLWAERQREMERREKARGEREWDRD
KVREFARPGEDGRRSRSRERERKRRERAKSKEKKSDKKEKVDEPPAKLLDDLFLKTKAAP
CIYWLPLTEEQASQRLLERLERQKERERRRKEQEEAYKKREEEKKEKPKGREKDGGTATS
AVAAGRGADGDRERDRARDREGDKRKDSTHRAKRPSPGVGGGRRSRSRSNPRERRR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacattcgctccgagttgcggac
ctgaaagctgccctggagcaaaggaacctcccgaaaagcgggcagaagaacacgctcatc
aagcgactgaaaggggctctgatgctggaaaacctccagaggtcatcctcttctcatagt
gttctgcagccaaactctcagataggtgaagagatgtgccagaacagcttcataaagcaa
tacctggctaagcagcaggagctcctccgtcagagactcgagagagaggcgcagaaggaa
gacgaggatgaagaaagcccagccggaccggaggaggacgacgatcactctgaagacaat
gacagctcatcctatgttgcggataaacatcgagcttcactgtccaaggcctcagtacct
gatgttggcggaggaggtgattctgtgatgagtcacggtcctggttccactttccaccac
caagaggctcttgaaactccacgagtcagagtgcagcaggccacctttcagcagggacac
agggagcccccagcgccctcccctccccgtgctgttgcctccctgtcagtgcgcgtcctg
ggacagcccgactgccagggatttcctcttgctgccccccgcccccaggagaaggagccc
gccggccatagtcgacctggatcggctcacgttgtcctgaacctcagtcgttctgccaag
ggttcagcgggaaatcacgtccaggacgacagcgacgatgatgacgacgacgatgacgac
agtgatgacgaggacgaggactgggggcccggcaaagcaggacgccaaaagagaatgacc
cccacgctgccgcaggcggcccccagtatgtcatcggccgctgcaagatccaaacgcaag
cttcagcctccacagcacatcccgccgcctcaggtagatcccacccccatgcagctgcgc
caccccacgcctcccccctctcctccccccaacctgttccccctgcccgacactcccaag
caaagcccgccagacgagcaggaacgcgtcagcctccgagaggctcaggtggcacctttc
caacccctctcgatgcaaagacaagactctgattcgagctcccgttcgagcagcccggag
ccgcctgtgaagcgcagacacggacccctttcgctgctcgtacacaagatggagacagag
gaggcttcttcagcccccggcttgtccgaggagacggcacactcaacgcccgggcgctcc
aatgaagctccaccgctgcgtggatcagaagccgagaggaaaatgaaagagaagaaggag
agagagcaacaacaggaagagctggagagggaaagaaagaaaacacaggagcaggaacaa
gagaggaaacgcttggaggaagagaaggaaaaggagagaactcgactggaagaggagagg
aagcagcgtcagaaggaggaacaggaaaaggagagaaaacgccgggaggaggaaaatgac
cggaaatgtaaggaagaggaaaagagaagagaggagcagcggctaaaggaggaagaggaa
aagaaacagaagacagtcagtcaagacaggaaggtggccaaggctcaagattcaggttcc
tcttcagattctgattccaaatcagactcctcgtcaccctcgtcatcttcctcctcctcc
tcctcctcctccagggataaaacccaaactgctaatcagctgaagaaggcagaccagaag
caagacggagaggacgggaaaaagactaacttgggtaaagggttggagaaacaaaacctt
tcaaaaagggaggtttcggagcccagcacagccgaggtggaaccagactccgagagctcc
atggcccagcagctagcgtctgggtcagaaccggagagcagcgagagccggctggaggag
agcaccacccctaaggcttttgccgctcgcaggatatccttaagcagcaccaaggcatct
ccagccagaacagatggaggagcggcagagcccgacgccggaagtgcgggagggaggaag
aggcgatgggggtccagcacagccgttaccgtgaagaagccgtcgatcagcatcaccacg
gactcactgaagtctttgattccagacatcaaggtaaaccaggaggccgttgtggagctt
catcccgaggagctgcagtcgtctggagacgaggagaacttggacaccggtcggggcgac
ccagacaaaggcctcaagatccgtcgtaccgtcacgcaggttgtcccaagcgacagccag
gagaatggccaagcgaacgaagaggaagaagaagtggagaaggtggagagggaaaaaccc
tgcaggacttcaagagacaaacggaggaccagtctgtcagatgaaccctcagaacctcag
atatctgtgaacctcgatgaagaaacaaagaaagttactcccagcgacagtctggttcgc
cgctccataagtcaacagaagtccggcgtctccgtcacaatcgacgaccctgttcgcacg
accaggcagccctcgcctccacgcgggaaggtctccaacatcatccacgtgaccaacctg
gtccgaccctttaccctgctccagctgaaagagctgctgaaccggacaggaagtgtggtg
gaggagggattctggatcgacaagatcaagtctcactgctacgtcacgtatgctacatca
gaggaggctgtcgccaccaggacggcgcttcacggagtcaaatggcctgctagtaatccc
aaggttcttagtgtggacttcagtgagcaggatgagctggactttcacaagggcatcctg
aagccgaacaaagaggaggatcacgttgccccgccggttgttccccagaaccggctgccc
cctctaatgcccgagcgggacagggacaaggaccacgaacgagagcgagaccgggacaag
gagcgcgagcgagacagggagcgcgagcgggacaggggagtgcgggacctgtgggcggag
cgtcagagggagatggagcgccgggaaaaggcacggggcgagcgggaatgggaccgggat
aaagtccgcgagtttgcgagaccgggagaggacgggcggcggtctcgatccagagagagg
gagaggaaaaggagggagagggcaaagagcaaggagaagaagagtgataagaaggagaaa
gtagatgaacctcctgctaaattactagatgacctgttcctgaagaccaaagcagctcca
tgtatatactggcttcccctcactgaggagcaggcatcacagaggcttttagaacgctta
gagcgtcagaaggagcgcgaacgacggcgcaaggagcaagaggaggcgtacaaaaagcgt
gaagaagagaagaaggagaagccgaaaggtcgagagaaagacggcggcacggcgacgagc
gctgtcgccgccggcagaggggccgacggagacagagagcgagaccgggcccgcgacaga
gaaggggacaagcggaaggacagcacccaccgagccaagcggccctcgccaggtgttggc
ggcgggcggcgttctcgtagtcgtagcaaccccagagaacgacgccgctga
DBGET
integrated database retrieval system
